Detailed information
Bioinformatically predicted
Overview
| Name | comGB | Type | Machinery gene |
| Locus tag | D0819_RS08335 | Genome accession | NZ_CP031784 |
| Coordinates | 1590901..1591938 (-) | Length | 345 a.a. |
| NCBI ID | WP_021480022.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain HMNig-2 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1585901..1596938
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0819_RS08285 (D0819_08300) | tasA | 1585998..1586783 (-) | 786 | WP_014477324.1 | biofilm matrix protein TasA | - |
| D0819_RS08290 (D0819_08305) | sipW | 1586848..1587420 (-) | 573 | WP_003246088.1 | signal peptidase I SipW | - |
| D0819_RS08295 (D0819_08310) | tapA | 1587404..1588165 (-) | 762 | WP_077671431.1 | amyloid fiber anchoring/assembly protein TapA | - |
| D0819_RS08300 (D0819_08315) | yqzG | 1588436..1588762 (+) | 327 | WP_021480018.1 | YqzG/YhdC family protein | - |
| D0819_RS08305 (D0819_08320) | spoIITA | 1588804..1588983 (-) | 180 | WP_014480252.1 | YqzE family protein | - |
| D0819_RS08310 (D0819_08325) | comGG | 1589055..1589429 (-) | 375 | WP_021480019.1 | ComG operon protein ComGG | Machinery gene |
| D0819_RS08315 (D0819_08330) | comGF | 1589430..1589813 (-) | 384 | WP_031315212.1 | ComG operon protein ComGF | Machinery gene |
| D0819_RS08320 (D0819_08335) | comGE | 1589839..1590186 (-) | 348 | WP_021480020.1 | ComG operon protein 5 | Machinery gene |
| D0819_RS08325 (D0819_08340) | comGD | 1590170..1590601 (-) | 432 | WP_021480021.1 | comG operon protein ComGD | Machinery gene |
| D0819_RS08330 (D0819_08345) | comGC | 1590591..1590887 (-) | 297 | WP_003230162.1 | comG operon protein ComGC | Machinery gene |
| D0819_RS08335 (D0819_08350) | comGB | 1590901..1591938 (-) | 1038 | WP_021480022.1 | comG operon protein ComGB | Machinery gene |
| D0819_RS08340 (D0819_08355) | comGA | 1591925..1592995 (-) | 1071 | WP_004399124.1 | competence protein ComGA | Machinery gene |
| D0819_RS21685 | - | 1593284..1593421 (-) | 138 | WP_021480024.1 | hypothetical protein | - |
| D0819_RS08350 (D0819_08365) | corA | 1593423..1594376 (-) | 954 | WP_015483432.1 | magnesium transporter CorA | - |
| D0819_RS08355 (D0819_08370) | yqhB | 1594519..1595847 (+) | 1329 | WP_021480026.1 | hemolysin family protein | - |
| D0819_RS08360 (D0819_08375) | rsbRD | 1595900..1596736 (-) | 837 | WP_021480027.1 | RsbT co-antagonist protein RsbRD | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 39665.05 Da Isoelectric Point: 9.5258
>NTDB_id=311378 D0819_RS08335 WP_021480022.1 1590901..1591938(-) (comGB) [Bacillus subtilis strain HMNig-2]
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICISIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
MKKIRKVWSLKDQARLLKRLGEMTAGGYTLLDGLRLMELQMNKRQAADLTDTVTCLREGAPFYQVLKSLSFHKEAVGICY
FAETHGELPASMIQSGELLERKIAQADQLKRVLRYPLFLIFTVAVMFYMLQSIIIPQFSGIYQSMNMETSRSTDMLFAFF
QHIDLVIILLVLFTAGIGIYYWLVFKKKSPARQMLICISIPLVGKLVKLFNSYFFSLQLSSLLKSGLSIYDSLNAFKHQT
FLPFYRCEAEQLIERLKAGESIESAICGSPFYETDLSKVISHGQLSGRLDRELFTYSQFILQRLEHKAQKWTGILQPMIY
GFVAAMILLVYLSMLVPMYQMMNQM
Nucleotide
Download Length: 1038 bp
>NTDB_id=311378 D0819_RS08335 WP_021480022.1 1590901..1591938(-) (comGB) [Bacillus subtilis strain HMNig-2]
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGTATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
ATGAAAAAGATTAGAAAAGTCTGGTCATTAAAGGATCAAGCCAGGTTATTAAAGCGGCTCGGTGAAATGACTGCGGGGGG
ATATACGCTTCTGGATGGATTACGCCTGATGGAACTTCAGATGAATAAGAGGCAGGCGGCTGACTTGACTGATACGGTCA
CTTGTTTGAGGGAAGGGGCTCCGTTTTATCAAGTACTAAAGAGTTTGTCATTTCATAAGGAAGCCGTAGGTATTTGTTAT
TTTGCTGAAACACATGGTGAACTGCCTGCTTCCATGATCCAGAGCGGAGAGCTGCTGGAACGAAAAATTGCACAGGCAGA
CCAGCTGAAAAGAGTGCTGCGCTATCCGCTTTTCCTCATCTTTACGGTCGCTGTCATGTTTTATATGTTACAGTCCATCA
TCATTCCTCAGTTTTCCGGTATCTATCAATCGATGAATATGGAAACCTCACGTTCAACCGATATGCTTTTTGCTTTTTTT
CAGCATATTGATCTTGTGATCATTTTGCTTGTTCTTTTTACAGCAGGTATCGGGATTTATTATTGGCTTGTGTTTAAGAA
AAAATCACCTGCCCGGCAAATGCTGATTTGTATCAGTATTCCTTTGGTTGGAAAGCTTGTCAAGCTGTTTAACAGCTACT
TTTTTTCTTTGCAGCTAAGCAGCCTTTTAAAATCAGGCCTCTCAATTTATGACAGCCTTAATGCATTTAAACATCAAACG
TTTCTCCCTTTCTACCGCTGCGAGGCTGAACAATTGATTGAACGGCTAAAAGCCGGTGAGTCAATTGAATCCGCTATTTG
TGGAAGCCCTTTTTATGAAACTGATTTATCAAAAGTCATATCTCACGGCCAGCTGAGCGGCCGATTGGATCGGGAGCTTT
TCACATACAGCCAATTCATATTACAGCGGCTGGAACACAAAGCGCAAAAATGGACAGGCATCCTTCAGCCAATGATTTAT
GGATTTGTTGCAGCGATGATCTTACTTGTGTATTTATCTATGCTTGTGCCTATGTATCAGATGATGAATCAAATGTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comGB | Bacillus subtilis subsp. subtilis str. 168 |
99.071 |
93.623 |
0.928 |