Detailed information NTG0031067

Bioinformatically predicted

Overview

• Name: comGD
• Type: Machinery gene
• Locus tag: SSUBM407_RS00765
• Genome accession: NC_012926
• Coordinates: 122050..122457 (+)
• Length: 135 a.a.
• NCBI ID: WP_011921721.1
• Uniprot ID: A0A0H3MT39
• Organism: Streptococcus suis BM407
• Function: dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 117050..127457

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SSUBM407_RS00740 (SSUBM407_0121)	-	118458..118823 (+)	366	WP_002936568.1	DUF1033 family protein	-
SSUBM407_RS00745 (SSUBM407_0122)	-	118858..119801 (-)	944	Protein_115	S66 family peptidase	-
SSUBM407_RS00750 (SSUBM407_0123)	comGA	119887..120837 (+)	951	WP_011921718.1	competence type IV pilus ATPase ComGA	Machinery gene
SSUBM407_RS00755 (SSUBM407_0124)	comGB	120749..121786 (+)	1038	WP_011921719.1	competence type IV pilus assembly protein ComGB	Machinery gene
SSUBM407_RS00760 (SSUBM407_0125)	comGC	121788..122069 (+)	282	WP_011921720.1	competence type IV pilus major pilin ComGC	Machinery gene
SSUBM407_RS00765 (SSUBM407_0126)	comGD	122050..122457 (+)	408	WP_011921721.1	competence type IV pilus minor pilin ComGD	Machinery gene
SSUBM407_RS00770 (SSUBM407_0127)	comGE	122429..122722 (+)	294	WP_011921722.1	competence type IV pilus minor pilin ComGE	Machinery gene
SSUBM407_RS00775 (SSUBM407_0128)	comGF/cglF	122709..123143 (+)	435	WP_011922561.1	competence type IV pilus minor pilin ComGF	Machinery gene
SSUBM407_RS00780 (SSUBM407_0129)	comGG	123121..123435 (+)	315	WP_228475123.1	competence type IV pilus minor pilin ComGG	Machinery gene
SSUBM407_RS00785 (SSUBM407_0130)	comGH	123588..124541 (+)	954	WP_011922562.1	class I SAM-dependent methyltransferase	Machinery gene
SSUBM407_RS00790 (SSUBM407_0131)	-	124591..125778 (+)	1188	WP_012775473.1	acetate kinase	-
SSUBM407_RS00795 (SSUBM407_0132)	-	126092..126643 (+)	552	WP_012775474.1	folate family ECF transporter S component	-

Sequence

Protein

• Length: 135 a.a.
• Molecular weight: 15367.59 Da
• Isoelectric Point: 8.3926

>NTDB_id=31067 SSUBM407_RS00765 WP_011921721.1 122050..122457(+) (comGD) [Streptococcus suis BM407]
MLRRKNKAFTLFESLLTLLVVSFLAVSLSGTVQTVFRSVQEEIFLWEFEAIYKDSQKLAASSHKKVNLAIGGQEVTNGYQ
AVEVPRNVEVLEEKTIQFEEDGGNSSLTKIRFHLSQKIVTYQLYIGSGRYKKTEE

Nucleotide

• Length: 408 bp

>NTDB_id=31067 SSUBM407_RS00765 WP_011921721.1 122050..122457(+) (comGD) [Streptococcus suis BM407]
ATGCTACGGCGAAAAAATAAGGCTTTTACCCTGTTTGAAAGCCTGCTGACCTTGTTGGTTGTCAGTTTTTTAGCTGTTTC
CTTATCAGGAACAGTACAAACGGTCTTTCGGTCTGTTCAGGAAGAAATTTTTCTCTGGGAATTTGAGGCCATCTATAAAG
ACAGTCAGAAATTAGCAGCCAGTTCCCACAAAAAAGTGAACCTTGCTATCGGTGGACAGGAGGTTACAAATGGTTATCAG
GCTGTAGAGGTGCCCAGAAACGTAGAGGTCTTAGAGGAGAAAACTATTCAGTTTGAAGAAGATGGTGGAAATTCTTCTCT
GACCAAGATTCGTTTTCACCTTAGTCAAAAAATAGTCACGTATCAATTATATATAGGGAGTGGTCGCTATAAGAAAACAG
AAGAATAA

Domains

No domain identified.

3D structure

• AlphaFold DB: A0A0H3MT39

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comGD	Streptococcus gordonii str. Challis substr. CH1	48.031	94.074	0.452
comGD	Streptococcus mutans UA140	46.512	95.556	0.444
comGD	Streptococcus mutans UA159	46.512	95.556	0.444
comGD/cglD	Streptococcus pneumoniae TIGR4	44.961	95.556	0.43
comGD/cglD	Streptococcus pneumoniae R6	44.961	95.556	0.43
comGD/cglD	Streptococcus pneumoniae Rx1	44.961	95.556	0.43
comGD/cglD	Streptococcus pneumoniae D39	44.961	95.556	0.43
comGD/cglD	Streptococcus mitis NCTC 12261	44.186	95.556	0.422
comGD/cglD	Streptococcus mitis SK321	43.411	95.556	0.415
comGD	Lactococcus lactis subsp. cremoris KW2	39.062	94.815	0.37