Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SaO55_RS00130 Genome accession   NZ_CP038268
Coordinates   30227..31027 (+) Length   266 a.a.
NCBI ID   WP_135789093.1    Uniprot ID   -
Organism   Staphylococcus aureus strain O55 isolate B118     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 25227..36027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SaO55_RS00115 (SaO55_0021) walK 25897..27723 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  SaO55_RS00120 (SaO55_0022) yycH 27716..29050 (+) 1335 WP_001060140.1 two-component system activity regulator YycH -
  SaO55_RS00125 (SaO55_0023) yycI 29051..29839 (+) 789 WP_001104163.1 two-component system regulatory protein YycI -
  SaO55_RS00130 (SaO55_0024) vicX 30227..31027 (+) 801 WP_135789093.1 MBL fold metallo-hydrolase Regulator
  SaO55_RS00135 (SaO55_0025) adsA 31254..33572 (+) 2319 WP_135789094.1 LPXTG-anchored adenosine synthase AdsA -
  SaO55_RS00140 (SaO55_0027) rlmH 33941..34420 (+) 480 WP_000704778.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  SaO55_RS00145 (SaO55_0028) pycC 34461..35732 (+) 1272 WP_000368659.1 Pycsar phage resistance system cytidylate cyclase PycC -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30361.61 Da        Isoelectric Point: 6.4995

>NTDB_id=310567 SaO55_RS00130 WP_135789093.1 30227..31027(+) (vicX) [Staphylococcus aureus strain O55 isolate B118]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHYIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=310567 SaO55_RS00130 WP_135789093.1 30227..31027(+) (vicX) [Staphylococcus aureus strain O55 isolate B118]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TTTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACTGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAGAGTAATCATGACGTAGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGCAACACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAATATGAAAGATTTGGCGCGTATGAGTGTTGGTCAAGTATTGAAC
GAACACTATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

48.638

96.617

0.47

Multiple sequence alignment