Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | D0T92_RS08450 | Genome accession | NZ_CP031700 |
| Coordinates | 1821049..1821345 (-) | Length | 98 a.a. |
| NCBI ID | WP_151051958.1 | Uniprot ID | A0A5J6PV29 |
| Organism | Neisseria zalophi strain ATCC BAA-2455 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1816049..1826345
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0T92_RS08425 (D0T92_08485) | ribBA | 1816279..1817637 (+) | 1359 | WP_151053036.1 | bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II | - |
| D0T92_RS08430 (D0T92_08490) | ribF | 1817790..1818719 (+) | 930 | WP_151051950.1 | bifunctional riboflavin kinase/FAD synthetase | - |
| D0T92_RS08435 (D0T92_08495) | - | 1818878..1819267 (+) | 390 | WP_151051952.1 | RidA family protein | - |
| D0T92_RS08440 (D0T92_08500) | - | 1819397..1820233 (+) | 837 | WP_151051954.1 | symmetrical bis(5'-nucleosyl)-tetraphosphatase | - |
| D0T92_RS08445 (D0T92_08505) | - | 1820429..1820920 (+) | 492 | WP_151051956.1 | peptidylprolyl isomerase | - |
| D0T92_RS08450 (D0T92_08510) | comE | 1821049..1821345 (-) | 297 | WP_151051958.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10091.71 Da Isoelectric Point: 10.1336
>NTDB_id=310560 D0T92_RS08450 WP_151051958.1 1821049..1821345(-) (comE) [Neisseria zalophi strain ATCC BAA-2455]
MKRYLLGIWAALSVTMAAAAVNINTAGAEELAELPGIGPSKAAAIVAYRDENGAFKSVAELKNVKGIGDGILAKVREEAV
TADNAANANKKAKPALKK
MKRYLLGIWAALSVTMAAAAVNINTAGAEELAELPGIGPSKAAAIVAYRDENGAFKSVAELKNVKGIGDGILAKVREEAV
TADNAANANKKAKPALKK
Nucleotide
Download Length: 297 bp
>NTDB_id=310560 D0T92_RS08450 WP_151051958.1 1821049..1821345(-) (comE) [Neisseria zalophi strain ATCC BAA-2455]
ATGAAGCGTTATTTGTTGGGCATCTGGGCGGCGCTATCGGTGACGATGGCTGCGGCAGCGGTGAATATCAATACGGCGGG
GGCGGAGGAGTTGGCCGAGCTGCCGGGTATCGGGCCCTCGAAGGCGGCGGCGATTGTGGCCTACCGTGATGAGAATGGTG
CCTTTAAGTCGGTGGCAGAGTTGAAGAATGTGAAGGGGATTGGCGACGGTATTTTAGCGAAGGTGCGCGAAGAGGCCGTT
ACCGCCGACAATGCCGCCAATGCCAATAAAAAAGCCAAACCCGCCCTGAAAAAGTAA
ATGAAGCGTTATTTGTTGGGCATCTGGGCGGCGCTATCGGTGACGATGGCTGCGGCAGCGGTGAATATCAATACGGCGGG
GGCGGAGGAGTTGGCCGAGCTGCCGGGTATCGGGCCCTCGAAGGCGGCGGCGATTGTGGCCTACCGTGATGAGAATGGTG
CCTTTAAGTCGGTGGCAGAGTTGAAGAATGTGAAGGGGATTGGCGACGGTATTTTAGCGAAGGTGCGCGAAGAGGCCGTT
ACCGCCGACAATGCCGCCAATGCCAATAAAAAAGCCAAACCCGCCCTGAAAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
48.485 |
100 |
0.49 |
| comE | Neisseria gonorrhoeae MS11 |
48.485 |
100 |
0.49 |
| comE | Neisseria gonorrhoeae MS11 |
48.485 |
100 |
0.49 |
| comE | Neisseria gonorrhoeae MS11 |
48.485 |
100 |
0.49 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
47.436 |
79.592 |
0.378 |
| comEA | Vibrio cholerae C6706 |
59.016 |
62.245 |
0.367 |
| comEA | Vibrio cholerae strain A1552 |
59.016 |
62.245 |
0.367 |