Detailed information
Bioinformatically predicted
Overview
| Name | comE | Type | Machinery gene |
| Locus tag | D0T92_RS00130 | Genome accession | NZ_CP031700 |
| Coordinates | 28951..29247 (-) | Length | 98 a.a. |
| NCBI ID | WP_151049093.1 | Uniprot ID | A0A5J6PRJ6 |
| Organism | Neisseria zalophi strain ATCC BAA-2455 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 23951..34247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D0T92_RS00115 (D0T92_00115) | fnr | 25140..25874 (+) | 735 | WP_225315115.1 | fumarate/nitrate reduction transcriptional regulator Fnr | - |
| D0T92_RS00120 (D0T92_00120) | - | 25968..27221 (-) | 1254 | WP_151049088.1 | NRAMP family divalent metal transporter | - |
| D0T92_RS00125 (D0T92_00125) | - | 27431..28684 (-) | 1254 | WP_151049090.1 | Nramp family divalent metal transporter | - |
| D0T92_RS00130 (D0T92_00130) | comE | 28951..29247 (-) | 297 | WP_151049093.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
Sequence
Protein
Download Length: 98 a.a. Molecular weight: 10136.70 Da Isoelectric Point: 9.5404
>NTDB_id=310534 D0T92_RS00130 WP_151049093.1 28951..29247(-) (comE) [Neisseria zalophi strain ATCC BAA-2455]
MKRYLLGIWAALSVTMAAAAVNINTAGAEELAELPGIGPSKAAAIVAYRDENGAFKSVAELKNVKGIGDGILAKVREEAV
TADNADNADKKAKPALKK
MKRYLLGIWAALSVTMAAAAVNINTAGAEELAELPGIGPSKAAAIVAYRDENGAFKSVAELKNVKGIGDGILAKVREEAV
TADNADNADKKAKPALKK
Nucleotide
Download Length: 297 bp
>NTDB_id=310534 D0T92_RS00130 WP_151049093.1 28951..29247(-) (comE) [Neisseria zalophi strain ATCC BAA-2455]
ATGAAGCGTTATTTGTTGGGCATCTGGGCGGCGCTATCGGTGACGATGGCTGCGGCAGCGGTGAATATCAATACGGCGGG
GGCGGAGGAGTTGGCCGAGCTGCCGGGTATCGGGCCCTCGAAGGCGGCGGCGATTGTGGCCTACCGTGATGAGAATGGTG
CCTTTAAGTCGGTGGCAGAGTTGAAGAATGTGAAGGGGATTGGCGACGGTATTTTAGCGAAGGTGCGCGAAGAGGCCGTT
ACCGCCGACAATGCCGACAATGCCGATAAAAAAGCCAAACCCGCCCTGAAAAAGTAA
ATGAAGCGTTATTTGTTGGGCATCTGGGCGGCGCTATCGGTGACGATGGCTGCGGCAGCGGTGAATATCAATACGGCGGG
GGCGGAGGAGTTGGCCGAGCTGCCGGGTATCGGGCCCTCGAAGGCGGCGGCGATTGTGGCCTACCGTGATGAGAATGGTG
CCTTTAAGTCGGTGGCAGAGTTGAAGAATGTGAAGGGGATTGGCGACGGTATTTTAGCGAAGGTGCGCGAAGAGGCCGTT
ACCGCCGACAATGCCGACAATGCCGATAAAAAAGCCAAACCCGCCCTGAAAAAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comE | Neisseria gonorrhoeae MS11 |
48.485 |
100 |
0.49 |
| comE | Neisseria gonorrhoeae MS11 |
48.485 |
100 |
0.49 |
| comE | Neisseria gonorrhoeae MS11 |
48.485 |
100 |
0.49 |
| comE | Neisseria gonorrhoeae MS11 |
48.485 |
100 |
0.49 |
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
47.436 |
79.592 |
0.378 |
| comEA | Vibrio cholerae C6706 |
59.016 |
62.245 |
0.367 |
| comEA | Vibrio cholerae strain A1552 |
59.016 |
62.245 |
0.367 |