Detailed information NTG0309863

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: EYQ98_RS05645
• Genome accession: NZ_CP038186
• Coordinates: 1129420..1130538 (+)
• Length: 372 a.a.
• NCBI ID: WP_003179978.1
• Uniprot ID: Q65M68
• Organism: Bacillus licheniformis strain MCC 2514
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1124420..1135538

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EYQ98_RS05625 (EYQ98_05625)	-	1124561..1126285 (-)	1725	WP_003179977.1	T7SS effector LXG polymorphic toxin	-
EYQ98_RS05630 (EYQ98_05630)	-	1126551..1126847 (+)	297	WP_011201595.1	DUF3800 domain-containing protein	-
EYQ98_RS05635 (EYQ98_05635)	-	1127078..1127518 (-)	441	WP_009329006.1	DUF6756 family protein	-
EYQ98_RS05640 (EYQ98_05640)	-	1127535..1129094 (-)	1560	WP_011197679.1	T7SS effector LXG polymorphic toxin	-
EYQ98_RS05645 (EYQ98_05645)	rapC	1129420..1130538 (+)	1119	WP_003179978.1	Rap family tetratricopeptide repeat protein	Regulator
EYQ98_RS05650 (EYQ98_05650)	-	1131331..1132656 (+)	1326	WP_009329004.1	TGS domain-containing protein	-
EYQ98_RS05655 (EYQ98_05655)	-	1132903..1133121 (+)	219	WP_003179982.1	hypothetical protein	-
EYQ98_RS05660 (EYQ98_05660)	aroD	1133509..1134273 (+)	765	WP_003179983.1	type I 3-dehydroquinate dehydratase	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 43946.57 Da
• Isoelectric Point: 6.5966

>NTDB_id=309863 EYQ98_RS05645 WP_003179978.1 1129420..1130538(+) (rapC) [Bacillus licheniformis strain MCC 2514]
METIPSSEVGIKINRWYNEIQKLNVIEAERLKAEVHLAIERMEEDQDLLSYYQLMNFRHELMLEYLFPAEKKLSKSDYLR
EIEGQGRKLSGLLEYYFSFFTGMYHFSRGKYIKAIKAYRAAEKKLTKVSDKIEKAEFYYKMAEVFYHMKQTHMSMYYVSL
AYDIYKSYDAYVIRRINCLFVVAGNYIDLSTHDQALPHLLSAKESAEDIQNKAIVAKALLNVAYCYNAMERPTKAIEYFH
KAIDVAKEIKAKELTQAYYDLALIHFRNNENIEGRKFYEKALESARVFEDELFLCLLDVLEALFIKSANKSEVLETMKPL
RDSRGYPYLEELALEAALFYTRNERPNDSIFFYDQMVQAQKQIKRGDFLYEI

Nucleotide

• Length: 1119 bp

>NTDB_id=309863 EYQ98_RS05645 WP_003179978.1 1129420..1130538(+) (rapC) [Bacillus licheniformis strain MCC 2514]
TTGGAGACTATCCCGTCTTCAGAAGTTGGAATCAAAATAAACCGCTGGTACAACGAAATTCAAAAATTAAACGTAATAGA
AGCAGAACGATTAAAGGCGGAAGTTCACTTAGCTATAGAAAGAATGGAAGAAGATCAGGACTTGCTTTCCTATTATCAGC
TTATGAATTTTAGACATGAGTTAATGTTGGAATATCTTTTCCCGGCAGAAAAAAAGCTGAGCAAATCTGATTATCTTAGG
GAAATTGAGGGACAGGGAAGAAAATTGTCAGGCTTGCTCGAATACTATTTTTCCTTTTTCACCGGAATGTATCATTTTTC
TCGCGGAAAATACATAAAGGCAATCAAGGCATATAGAGCAGCAGAAAAAAAGTTGACGAAAGTTTCAGATAAAATAGAAA
AGGCTGAATTCTATTATAAGATGGCGGAAGTGTTTTATCATATGAAACAGACTCATATGTCAATGTATTATGTGTCTCTC
GCTTATGATATTTATAAATCCTATGATGCATATGTGATTCGAAGAATTAATTGTCTATTCGTTGTTGCTGGGAATTACAT
TGATTTATCAACCCATGATCAAGCTTTACCGCATCTTTTAAGCGCTAAGGAATCCGCGGAAGACATTCAAAACAAGGCGA
TCGTTGCAAAGGCTCTTTTAAATGTAGCATATTGTTATAATGCAATGGAGAGACCAACAAAAGCTATTGAATACTTTCAT
AAGGCGATTGATGTAGCAAAGGAAATAAAGGCAAAAGAACTGACTCAGGCTTATTATGATTTGGCATTAATTCACTTTCG
AAATAACGAAAATATTGAAGGACGAAAATTTTATGAAAAGGCGCTTGAAAGTGCGCGGGTATTTGAAGATGAATTATTCC
TGTGTCTGTTGGATGTTTTAGAGGCACTGTTTATAAAATCAGCTAATAAGTCAGAGGTACTAGAAACAATGAAACCATTA
CGGGATAGTCGTGGTTACCCCTATCTTGAGGAACTGGCATTAGAAGCAGCTCTATTCTATACTAGGAATGAGCGGCCAAA
TGATTCCATATTTTTTTATGATCAGATGGTGCAGGCTCAGAAACAAATCAAAAGGGGCGACTTTCTGTATGAAATCTAA

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (3-64)

• Tetratricopeptide repeat (TPR_12) (215-285)

3D structure

• AlphaFold DB: Q65M68

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	37.5	100	0.379
rapF	Bacillus subtilis subsp. subtilis str. 168	36.702	100	0.371