Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   DZR90_RS09600 Genome accession   NZ_CP031629
Coordinates   1891357..1892580 (+) Length   407 a.a.
NCBI ID   WP_011285340.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain MGAS28278     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1886357..1897580
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DZR90_RS09585 (DZR90_09585) - 1889496..1890270 (-) 775 Protein_1797 IS30 family transposase -
  DZR90_RS09595 (DZR90_09595) rlmH 1890666..1891145 (-) 480 WP_002981964.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DZR90_RS09600 (DZR90_09600) htrA 1891357..1892580 (+) 1224 WP_011285340.1 trypsin-like peptidase domain-containing protein Regulator
  DZR90_RS09605 (DZR90_09605) spo0J 1892669..1893445 (+) 777 WP_021340715.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 407 a.a.        Molecular weight: 42786.41 Da        Isoelectric Point: 7.3103

>NTDB_id=308656 DZR90_RS09600 WP_011285340.1 1891357..1892580(+) (htrA) [Streptococcus pyogenes strain MGAS28278]
MPSMKYILKSLSILLIGFLGGLIAIITFNNLYPHSPSKINSGKATTSNMVFNNTTNTTKAVKAVQNAVVSVINYQDNPSS
SLSNPYTKLFGEGRSKENKDAELSIFSEGSGVIYRKDGNSAYVVTNNHVIDGAKRIEILMADGSKVVGELVGADTYSDLA
VVKISSDKIKTVAEFADSTKLNVGEVAIAIGSPLGTQYANSVTQGIVSSLSRTVTLKNENGETVSTNAIQTDAAINPGNS
GGPLINIEGQVIGINSSKISSTPTGSNGNSGAVEGIGFAIPSTDVIKIIKQLETNGEVIRPALGISMVNLNDLSTNALSQ
INIPTSVTGGIVVAEVKEGMPASGKLAQYDVITEIDGKTVNSISDLQSSLYGHDINDTIKVTFYRGTTKKKADIKLTKTT
QDLTKTQ

Nucleotide


Download         Length: 1224 bp        

>NTDB_id=308656 DZR90_RS09600 WP_011285340.1 1891357..1892580(+) (htrA) [Streptococcus pyogenes strain MGAS28278]
ATGCCAAGTATGAAATATATCTTAAAATCCTTAAGTATTTTACTAATTGGATTTTTAGGAGGATTAATAGCAATTATTAC
ATTCAATAATCTCTACCCACATTCTCCTTCAAAAATAAATTCAGGTAAGGCAACAACTAGTAATATGGTTTTTAACAACA
CAACCAATACTACTAAAGCTGTCAAAGCTGTTCAAAATGCAGTTGTATCAGTTATTAATTATCAAGATAACCCTTCTTCA
TCCCTTTCTAACCCTTATACAAAACTCTTTGGAGAAGGGCGTTCAAAAGAGAATAAGGATGCTGAATTATCTATTTTTAG
TGAAGGATCTGGGGTCATTTATCGAAAAGATGGCAACTCCGCTTACGTTGTTACTAATAACCATGTTATCGACGGAGCTA
AACGAATTGAAATTCTTATGGCAGACGGATCTAAAGTTGTTGGTGAATTAGTTGGAGCTGATACTTATTCGGATTTAGCT
GTTGTTAAGATCTCTTCAGATAAGATAAAAACAGTAGCTGAATTTGCAGACTCTACAAAACTAAATGTTGGAGAAGTTGC
TATTGCTATCGGCAGCCCACTAGGAACACAATACGCTAATTCTGTTACTCAAGGAATCGTCTCTAGTTTAAGTCGTACTG
TAACTTTAAAAAACGAGAATGGTGAGACTGTCTCAACAAATGCTATTCAGACAGATGCTGCTATTAACCCTGGAAACTCT
GGTGGACCACTAATTAATATTGAGGGGCAAGTAATCGGAATTAATTCAAGTAAAATTTCTTCTACCCCAACTGGTAGCAA
CGGTAATAGTGGTGCTGTTGAAGGAATTGGTTTTGCTATCCCATCTACTGACGTTATTAAAATTATTAAACAACTAGAAA
CTAATGGTGAAGTTATCAGACCTGCTCTTGGAATATCCATGGTCAATTTAAATGACTTATCCACAAATGCTCTTAGCCAA
ATTAATATTCCAACTAGTGTAACTGGTGGTATTGTAGTAGCAGAAGTTAAGGAAGGAATGCCGGCATCTGGCAAACTTGC
TCAGTACGATGTGATTACAGAAATTGATGGCAAAACAGTTAATTCAATTAGTGATTTACAAAGTAGTCTATACGGACACG
ATATTAATGATACTATTAAAGTAACTTTTTATAGAGGAACTACAAAGAAAAAAGCAGATATCAAATTAACAAAAACTACT
CAAGATTTGACTAAAACGCAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

61.881

99.263

0.614

  htrA Streptococcus gordonii str. Challis substr. CH1

55.224

98.771

0.545

  htrA Streptococcus mitis NCTC 12261

53.071

100

0.531

  htrA Streptococcus pneumoniae Rx1

53.383

98.034

0.523

  htrA Streptococcus pneumoniae D39

53.383

98.034

0.523

  htrA Streptococcus pneumoniae R6

53.383

98.034

0.523

  htrA Streptococcus pneumoniae TIGR4

53.383

98.034

0.523


Multiple sequence alignment