Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   AB849_RS04115 Genome accession   NZ_CP036487
Coordinates   779410..780438 (-) Length   342 a.a.
NCBI ID   WP_049720835.1    Uniprot ID   A0ABS0QJM6
Organism   Thermoactinomyces vulgaris strain CDF     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 774410..785438
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB849_RS04085 (AB849_004085) ispF 774886..775365 (-) 480 WP_037996998.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  AB849_RS04090 (AB849_004090) ispD 775362..776051 (-) 690 WP_037996996.1 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase -
  AB849_RS04095 (AB849_004095) - 776167..777261 (-) 1095 WP_037996994.1 PIN/TRAM domain-containing protein -
  AB849_RS04100 (AB849_004100) - 777384..777881 (-) 498 WP_231564634.1 CarD family transcriptional regulator -
  AB849_RS04105 (AB849_004105) - 778154..778549 (+) 396 WP_037996988.1 hypothetical protein -
  AB849_RS04110 (AB849_004110) pssA 778597..779307 (-) 711 WP_037996982.1 CDP-diacylglycerol--serine O-phosphatidyltransferase -
  AB849_RS04115 (AB849_004115) disA 779410..780438 (-) 1029 WP_049720835.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  AB849_RS04120 (AB849_004120) radA/sms 780484..781857 (-) 1374 WP_037996979.1 DNA repair protein RadA Machinery gene
  AB849_RS04125 (AB849_004125) clpC 782065..784512 (-) 2448 WP_049720819.1 ATP-dependent Clp protease ATP-binding subunit Regulator

Sequence


Protein


Download         Length: 342 a.a.        Molecular weight: 38483.46 Da        Isoelectric Point: 5.0814

>NTDB_id=307883 AB849_RS04115 WP_049720835.1 779410..780438(-) (disA) [Thermoactinomyces vulgaris strain CDF]
MIAPGTPLREGLDNVLGAKTGALIVIGYDEGVREIVDGGFHIDCPFTPAYLYELAKMDGAIILSNDGKRILYANAQLVPD
SAIPSTETGIRHRTAQRTARQTGKLVVSISQRRNIITLYKGNFRYALKDMGVILTKANQAIQTLEKYKSVLDQTTTNLTA
LEFEELVTLSEVALVLQRVEMVLRIKREIETYIHELGTEGRLVSMQLEELVADTEDEAKLLIEDYCIDPCVSPEVVFQEL
QKLSSDDLLEHANLVRILGYPSSVNIEEEAVLPRGYRILHKIPRLPSHVIYKLVERFENLSRIMVATIDELDEVEGIGSV
RAKMIKEGLKRIQEQVFIDRHI

Nucleotide


Download         Length: 1029 bp        

>NTDB_id=307883 AB849_RS04115 WP_049720835.1 779410..780438(-) (disA) [Thermoactinomyces vulgaris strain CDF]
ATGATCGCTCCGGGAACTCCCTTGAGAGAAGGATTGGACAACGTCCTGGGGGCTAAAACAGGGGCTCTGATCGTGATCGG
CTATGACGAGGGAGTTCGCGAAATTGTGGATGGGGGTTTTCATATCGATTGTCCGTTTACGCCCGCTTATCTTTATGAAT
TGGCCAAGATGGACGGAGCGATTATTCTGAGTAACGACGGGAAAAGGATATTGTATGCAAACGCACAATTGGTTCCTGAT
TCCGCAATCCCTTCCACGGAAACAGGCATCCGTCACCGCACGGCGCAGCGAACGGCTAGGCAGACCGGGAAATTGGTGGT
CTCAATATCCCAGCGCAGAAATATTATCACTTTGTATAAAGGTAACTTTCGTTACGCCCTGAAAGATATGGGAGTGATTT
TGACCAAGGCCAACCAAGCCATCCAAACCTTGGAGAAATACAAATCCGTTTTGGATCAAACCACCACGAACCTGACGGCG
CTGGAGTTTGAAGAGTTGGTCACCTTGAGCGAAGTGGCACTGGTTTTGCAACGGGTAGAAATGGTGCTCAGAATCAAACG
CGAGATCGAAACATATATTCATGAATTGGGAACGGAAGGCCGACTGGTCAGTATGCAATTGGAGGAACTGGTGGCTGACA
CGGAAGATGAAGCGAAGTTGTTGATTGAGGACTATTGCATTGATCCGTGTGTTTCTCCAGAAGTGGTTTTCCAAGAGTTG
CAGAAGTTGTCGTCGGATGATTTGCTGGAACACGCCAACCTGGTGCGGATTTTGGGATATCCATCGTCCGTCAACATTGA
AGAGGAAGCCGTTTTGCCGCGCGGATACCGGATTCTTCATAAAATCCCGCGCCTGCCAAGCCATGTGATTTATAAATTAG
TTGAGCGCTTTGAAAATTTATCGAGAATCATGGTGGCAACCATCGATGAACTGGATGAGGTCGAAGGAATCGGAAGTGTG
CGCGCAAAGATGATCAAAGAAGGATTGAAGCGAATTCAGGAACAAGTATTTATTGACAGACATATATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

60.819

100

0.608


Multiple sequence alignment