Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   DV178_RS09240 Genome accession   NZ_CP031335
Coordinates   1562740..1563363 (+) Length   207 a.a.
NCBI ID   WP_063399721.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M25964     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1557740..1568363
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV178_RS14155 - 1557755..1557862 (+) 108 Protein_1498 IS5/IS1182 family transposase -
  DV178_RS09210 - 1557907..1558239 (+) 333 WP_002213854.1 hypothetical protein -
  DV178_RS09215 - 1558570..1559079 (+) 510 WP_063399725.1 isoprenylcysteine carboxyl methyltransferase family protein -
  DV178_RS09220 - 1559577..1560164 (-) 588 WP_002220670.1 superoxide dismutase -
  DV178_RS09230 dnaB 1560327..1561733 (+) 1407 WP_002220671.1 replicative DNA helicase -
  DV178_RS09235 pilH 1562042..1562716 (+) 675 WP_063399723.1 GspH/FimT family pseudopilin Machinery gene
  DV178_RS09240 pilV 1562740..1563363 (+) 624 WP_063399721.1 type IV pilus modification protein PilV Machinery gene
  DV178_RS09245 pilJ 1563360..1564304 (+) 945 WP_063399719.1 PilW family protein Machinery gene
  DV178_RS09250 pilK 1564283..1564879 (+) 597 WP_115432352.1 pilus assembly PilX family protein Machinery gene
  DV178_RS09255 pilL 1564884..1565381 (+) 498 WP_002235687.1 PilX family type IV pilin Machinery gene
  DV178_RS09270 - 1567716..1568144 (-) 429 Protein_1508 AzlC family ABC transporter permease -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 22259.15 Da        Isoelectric Point: 4.6684

>NTDB_id=306038 DV178_RS09240 WP_063399721.1 1562740..1563363(+) (pilV) [Neisseria meningitidis strain M25964]
MKNNDCFRLKDSQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNNTLSHTLSAVDGEFTIDAIKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGAAPTLSAGGAFSQNCD
GSANGDTLIKVLWVNDSAGDSDIARTNLEANGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 624 bp        

>NTDB_id=306038 DV178_RS09240 WP_063399721.1 1562740..1563363(+) (pilV) [Neisseria meningitidis strain M25964]
ATGAAGAATAATGATTGCTTCCGCCTGAAAGATTCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCGTTACTGTCTGTGCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACACAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACAATACACTATCGCATACACTATCAGCTGTGGATGGTGAGTTTACGATTGATGCCATAAA
AACTAAGACGCAGTTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCA
TCCATTACGCCGTCTGCAAGGATTCGTCGGGTGCTGCGCCGACATTGTCCGCCGGCGGTGCTTTTTCTCAAAATTGCGAT
GGTAGTGCAAATGGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTGCCCGTACGAA
TCTTGAAGCGAACGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGTGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(12-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

91.787

100

0.918
  pilI Neisseria gonorrhoeae MS11

80.193

100

0.802
  pilV Neisseria gonorrhoeae MS11

80.193

100

0.802

Multiple sequence alignment