Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Machinery gene
Locus tag   DV144_RS10150 Genome accession   NZ_CP031328
Coordinates   1709431..1710042 (-) Length   203 a.a.
NCBI ID   WP_115430906.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M18755     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1704431..1715042
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV144_RS10120 dut 1704994..1705446 (-) 453 WP_115430833.1 dUTP diphosphatase -
  DV144_RS10135 pilL 1707416..1707913 (-) 498 WP_205254973.1 PilX family type IV pilin Machinery gene
  DV144_RS10140 pilK 1707918..1708514 (-) 597 WP_115430835.1 pilus assembly protein Machinery gene
  DV144_RS10145 pilJ 1708493..1709434 (-) 942 WP_115430836.1 PilW family protein Machinery gene
  DV144_RS10150 pilV 1709431..1710042 (-) 612 WP_115430906.1 type IV pilus modification protein PilV Machinery gene
  DV144_RS10155 pilH 1710075..1710752 (-) 678 WP_115430837.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  DV144_RS10160 dnaB 1711061..1712467 (-) 1407 WP_115430838.1 replicative DNA helicase -
  DV144_RS10170 - 1712629..1713216 (+) 588 WP_002219449.1 superoxide dismutase -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 22053.98 Da        Isoelectric Point: 5.6219

>NTDB_id=305746 DV144_RS10150 WP_115430906.1 1709431..1710042(-) (pilV) [Neisseria meningitidis strain M18755]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHHTLSVVDGDFQVGVIKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGNAPTLSGNAFSSNCDNKAN
GDTLIKVLWVNDSAGDSDIAHTNLEANGDNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=305746 DV144_RS10150 WP_115430906.1 1709431..1710042(-) (pilV) [Neisseria meningitidis strain M18755]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAATCCCCAGTCCGGTATGGCACTGATAGAAGTCTTGGTTGCCATGCTCGT
TCTGACTATCGGTATTTTGGCACTATTGTCTGTTCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCAGAGACGCAAACCA
TCGTCAGTCAAATCACGCAAAACCTGATGGAGGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATCATACACTATCAGTTGTGGATGGCGATTTTCAGGTTGGTGTCATAAAAACTAAGAC
GCAATTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCCATTACG
CCGTCTGCAAGGATTCGTCGGGTAACGCGCCGACATTGTCCGGCAATGCTTTTTCTTCAAATTGCGACAATAAGGCAAAC
GGGGATACTTTAATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATTGCACATACGAATCTTGAAGCGAA
CGGCGACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterproScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

92.718

100

0.941
  pilI Neisseria gonorrhoeae MS11

84.236

100

0.842
  pilV Neisseria gonorrhoeae MS11

84.236

100

0.842

Multiple sequence alignment