Detailed information NTG0304969

Bioinformatically predicted

Overview

• Name: comP
• Type: Machinery gene
• Locus tag: DV114_RS01090
• Genome accession: NZ_CP031251
• Coordinates: 210101..210595 (+)
• Length: 164 a.a.
• NCBI ID: WP_199903543.1
• Uniprot ID: -
• Organism: Neisseria subflava strain M18660
• Function: DNA binding; DNA uptake; receptor of DNA uptake sequence (DUS) (predicted from homology) DNA binding and uptake

Genomic Context

Location: 205101..215595

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV114_RS01085	comE	209631..209918 (+)	288	WP_004520163.1	helix-hairpin-helix domain-containing protein	Machinery gene
DV114_RS01090	comP	210101..210595 (+)	495	WP_199903543.1	type IV pilin protein	Machinery gene
DV114_RS01095	-	210668..211492 (-)	825	WP_101755248.1	undecaprenyl-diphosphate phosphatase	-
DV114_RS01100	dsbA1	211537..212178 (-)	642	WP_101755418.1	thiol:disulfide interchange protein DsbA/DsbL	Machinery gene
DV114_RS01105	-	212190..213257 (-)	1068	WP_101755249.1	SPOR domain-containing protein	-
DV114_RS01110	comM	213412..214908 (-)	1497	WP_101755250.1	YifB family Mg chelatase-like AAA ATPase	Machinery gene
DV114_RS01115	-	214922..215242 (-)	321	WP_101755251.1	accessory factor UbiK family protein	-

Sequence

Protein

• Length: 164 a.a.
• Molecular weight: 18032.10 Da
• Isoelectric Point: 10.1982

>NTDB_id=304969 DV114_RS01090 WP_199903543.1 210101..210595(+) (comP) [Neisseria subflava strain M18660]
MYLKTFVGKRNGATVQRGYSLIQLLVVILLVSILATAAFTAYRESVRSANLRAAHAALLENARFMEQFYTKKGSFKLTST
KWPELPVKEAGGFCIRMSGQAKGILEGKFTLKAVALDREAEPRVLRLNESLTAVVCGKMKSKGSCTDGEEIFRGNDAECK
PFMG

Nucleotide

• Length: 495 bp

>NTDB_id=304969 DV114_RS01090 WP_199903543.1 210101..210595(+) (comP) [Neisseria subflava strain M18660]
ATGTACTTAAAAACATTTGTTGGCAAACGGAATGGAGCAACTGTGCAGAGGGGGTACTCTTTGATACAGCTGTTGGTGGT
GATACTGCTGGTTTCGATCTTGGCAACGGCGGCCTTTACGGCCTATCGGGAGTCAGTCCGCTCGGCCAACTTGCGTGCGG
CTCATGCCGCCCTGCTGGAAAATGCGCGCTTTATGGAGCAGTTCTACACAAAAAAGGGCAGCTTTAAGCTGACGTCGACG
AAGTGGCCGGAATTGCCGGTGAAGGAGGCGGGCGGTTTCTGTATCAGGATGAGCGGTCAGGCTAAGGGCATCCTGGAGGG
TAAGTTTACCTTGAAGGCGGTGGCGTTGGACAGGGAGGCGGAACCGAGGGTATTGCGTTTGAACGAGTCGTTGACAGCAG
TAGTGTGCGGGAAGATGAAGAGTAAGGGAAGCTGTACGGACGGCGAGGAGATATTTAGGGGCAATGATGCGGAGTGTAAG
CCTTTTATGGGGTGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (41-120)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comP	Neisseria subflava NJ9703	92.683	100	0.927
comP	Neisseria meningitidis 8013	51.007	90.854	0.463
comP	Neisseria gonorrhoeae MS11	51.02	89.634	0.457