Detailed information NTG0030400

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HSM_RS03775
• Genome accession: NC_010519
• Coordinates: 846611..847717 (+)
• Length: 368 a.a.
• NCBI ID: WP_012341563.1
• Uniprot ID: -
• Organism: Histophilus somni 2336
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 841611..852717

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HSM_RS03755 (HSM_0733)	proA	842601..843857 (-)	1257	WP_012341559.1	glutamate-5-semialdehyde dehydrogenase	-
HSM_RS03760 (HSM_0734)	-	843867..844538 (-)	672	WP_012341560.1	trimeric intracellular cation channel family protein	-
HSM_RS03765 (HSM_0735)	-	844699..845286 (-)	588	WP_012341561.1	thymidine kinase	-
HSM_RS03770 (HSM_0736)	tsaD	845348..846376 (-)	1029	WP_012341562.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD	-
HSM_RS03775 (HSM_0737)	dprA	846611..847717 (+)	1107	WP_012341563.1	DNA-processing protein DprA	Machinery gene
HSM_RS03780 (HSM_0738)	rsmD	847700..848302 (-)	603	WP_012341564.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
HSM_RS03785 (HSM_0739)	ftsY	848366..849709 (+)	1344	WP_012341565.1	signal recognition particle-docking protein FtsY	-
HSM_RS03790 (HSM_0740)	murJ	849871..851442 (-)	1572	WP_012341567.1	murein biosynthesis integral membrane protein MurJ	-
HSM_RS03795 (HSM_0741)	rpsT	851720..851983 (+)	264	WP_011608572.1	30S ribosomal protein S20	-

Sequence

Protein

• Length: 368 a.a.
• Molecular weight: 41535.73 Da
• Isoelectric Point: 6.3669

>NTDB_id=30400 HSM_RS03775 WP_012341563.1 846611..847717(+) (dprA) [Histophilus somni 2336]
MDNRNELLLRLLQVPKLGASGITQLLSHIDLKTLEDYDDVAFHYLGWKPEQINRWLYPDLRYIEPALFWASKKGHYLMNF
YQENYPYLLKQTIGAPPLLFIKGNPEILAQQQVAIVGSRHCSHYGEYWAKYFATELFLAGFVITSGLALGIDGFCHQAVV
DIQGQTIGVLGGGLEELYPKQHKKLAQQMLDYGGALVSEFLPHQPPKPQHFPQRNRIISGLSKGVLVVEATEKSGSLITA
RYALEQNREVFALPGQIQNEYSQGCHRLIKDGALLVENVADIVENLSPFMHYERQLTAKQIETQFPPAYKLPASPTYPEL
YAHIGYTPVGLDELSNKSGLSVDTLLIQLLELELQDLVIAEKGLYRRT

Nucleotide

• Length: 1107 bp

>NTDB_id=30400 HSM_RS03775 WP_012341563.1 846611..847717(+) (dprA) [Histophilus somni 2336]
ATGGATAACCGGAATGAGCTGTTACTGCGTTTGTTACAAGTGCCGAAGTTGGGAGCGTCCGGAATAACTCAACTTTTATC
GCACATCGATTTAAAAACATTAGAGGATTATGATGATGTTGCGTTTCATTATTTAGGCTGGAAACCTGAACAGATAAATA
GGTGGTTGTATCCGGATCTTAGATATATTGAACCTGCATTATTTTGGGCAAGCAAAAAGGGACATTATTTGATGAATTTT
TATCAAGAGAATTACCCTTATTTATTAAAGCAAACCATAGGTGCTCCCCCTTTGTTATTTATCAAAGGCAATCCGGAAAT
ACTTGCTCAACAACAAGTTGCTATTGTAGGAAGCCGTCATTGCTCACATTATGGCGAGTATTGGGCAAAGTATTTTGCAA
CGGAATTGTTCCTTGCTGGTTTTGTTATTACCAGTGGACTGGCTTTAGGGATAGACGGTTTTTGTCATCAGGCTGTTGTG
GATATTCAAGGACAAACTATCGGGGTATTAGGGGGAGGTTTGGAAGAGTTGTATCCCAAACAACATAAAAAATTAGCACA
ACAAATGCTAGATTATGGCGGTGCGTTAGTGTCAGAATTTTTACCTCATCAGCCTCCCAAGCCACAACATTTTCCTCAAC
GTAATCGCATTATTAGCGGACTTTCTAAAGGTGTTTTAGTGGTTGAGGCAACAGAAAAAAGCGGTTCACTCATTACTGCA
CGTTATGCTTTAGAACAAAATAGAGAAGTTTTTGCACTTCCGGGGCAAATTCAAAATGAGTATAGTCAAGGGTGTCATAG
ATTAATAAAAGACGGTGCATTGTTAGTAGAGAATGTTGCAGATATTGTAGAAAATTTATCGCCTTTTATGCATTATGAAC
GTCAACTAACAGCAAAACAGATAGAAACGCAATTTCCGCCGGCTTATAAGTTACCTGCTTCACCGACTTATCCTGAACTC
TATGCCCATATTGGATATACGCCGGTAGGGCTTGATGAATTATCAAATAAAAGCGGATTAAGTGTAGATACCTTATTGAT
ACAGCTGTTAGAACTTGAATTGCAAGATCTCGTTATTGCTGAAAAAGGGTTATATCGACGGACTTAA

Domains

Predicted by InterproScan.

• DprA winged helix domain (DprA_WH) (310-361)

• DNA recombination-mediator protein A (DNA_processg_A) (71-277)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Haemophilus influenzae Rd KW20	61.126	100	0.62
dprA	Glaesserella parasuis strain SC1401	50.432	94.293	0.476
dprA	Vibrio cholerae strain A1552	44.986	100	0.451
dprA	Vibrio campbellii strain DS40M4	41.096	99.185	0.408
dprA	Legionella pneumophila strain ERS1305867	41.176	87.772	0.361