Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | BLDA23_RS06935 | Genome accession | NZ_CP031126 |
| Coordinates | 1314025..1314603 (+) | Length | 192 a.a. |
| NCBI ID | WP_003180354.1 | Uniprot ID | A0A1Y0YMJ8 |
| Organism | Bacillus licheniformis strain 0DA23-1 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1309025..1319603
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BLDA23_RS06915 (BLDA23_06915) | - | 1309527..1310819 (-) | 1293 | WP_003180349.1 | globin-coupled sensor protein | - |
| BLDA23_RS06920 (BLDA23_06920) | - | 1310926..1312455 (-) | 1530 | WP_003180351.1 | FAD-dependent oxidoreductase | - |
| BLDA23_RS06925 (BLDA23_06925) | - | 1312596..1313453 (+) | 858 | WP_003180352.1 | SDR family oxidoreductase | - |
| BLDA23_RS06930 (BLDA23_06930) | - | 1313519..1313752 (-) | 234 | WP_003180353.1 | IDEAL domain-containing protein | - |
| BLDA23_RS06935 (BLDA23_06935) | comK | 1314025..1314603 (+) | 579 | WP_003180354.1 | competence protein ComK | Regulator |
| BLDA23_RS06940 (BLDA23_06940) | - | 1314597..1314962 (-) | 366 | WP_003180357.1 | hypothetical protein | - |
| BLDA23_RS06945 (BLDA23_06945) | - | 1315171..1315782 (+) | 612 | WP_003180359.1 | TVP38/TMEM64 family protein | - |
| BLDA23_RS06950 (BLDA23_06950) | lepB | 1315795..1316313 (+) | 519 | WP_003180360.1 | signal peptidase I | - |
| BLDA23_RS06955 (BLDA23_06955) | - | 1316468..1318243 (-) | 1776 | WP_003180361.1 | S8 family peptidase | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22432.65 Da Isoelectric Point: 8.6274
>NTDB_id=303520 BLDA23_RS06935 WP_003180354.1 1314025..1314603(+) (comK) [Bacillus licheniformis strain 0DA23-1]
MSTEDMTKDTYEVNSSTMAVLPLGEGEKPASKILETDRTFRVNMKPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTFVTFVNGETLELPVSISSFENQVYRTAWLRTKFIDRIEGN
PMQKKQEFMLYPKEDRNQLIYEFILRELKKRY
MSTEDMTKDTYEVNSSTMAVLPLGEGEKPASKILETDRTFRVNMKPFQIIERSCRYFGSSYAGRKAGTYEVIKVSHKPPI
MVDHSNNIFLFPTFSSTRPQCGWLSHAHVHEFCAAKYDNTFVTFVNGETLELPVSISSFENQVYRTAWLRTKFIDRIEGN
PMQKKQEFMLYPKEDRNQLIYEFILRELKKRY
Nucleotide
Download Length: 579 bp
>NTDB_id=303520 BLDA23_RS06935 WP_003180354.1 1314025..1314603(+) (comK) [Bacillus licheniformis strain 0DA23-1]
ATGAGCACAGAGGATATGACAAAGGATACGTATGAAGTAAACAGTTCGACAATGGCTGTCCTGCCTCTGGGAGAGGGGGA
GAAACCCGCCTCAAAAATACTTGAGACCGACAGGACTTTCCGCGTCAATATGAAGCCGTTTCAAATTATCGAAAGAAGCT
GCCGCTATTTCGGATCGAGCTATGCGGGAAGAAAAGCGGGCACATATGAAGTCATTAAAGTTTCCCATAAACCGCCGATC
ATGGTGGATCACTCAAACAACATTTTTCTTTTCCCCACATTTTCCTCAACTCGTCCTCAGTGCGGGTGGCTTTCCCATGC
GCATGTTCACGAGTTTTGCGCGGCAAAGTATGACAACACGTTTGTCACGTTTGTCAACGGGGAAACGCTGGAGCTGCCCG
TATCCATCTCATCTTTCGAAAACCAGGTTTACCGAACGGCATGGCTGAGAACAAAATTTATCGACAGGATTGAAGGAAAC
CCCATGCAGAAGAAACAGGAATTTATGCTCTATCCGAAAGAAGACCGGAATCAGCTGATATACGAATTCATCCTCAGGGA
GCTGAAAAAGCGCTATTGA
ATGAGCACAGAGGATATGACAAAGGATACGTATGAAGTAAACAGTTCGACAATGGCTGTCCTGCCTCTGGGAGAGGGGGA
GAAACCCGCCTCAAAAATACTTGAGACCGACAGGACTTTCCGCGTCAATATGAAGCCGTTTCAAATTATCGAAAGAAGCT
GCCGCTATTTCGGATCGAGCTATGCGGGAAGAAAAGCGGGCACATATGAAGTCATTAAAGTTTCCCATAAACCGCCGATC
ATGGTGGATCACTCAAACAACATTTTTCTTTTCCCCACATTTTCCTCAACTCGTCCTCAGTGCGGGTGGCTTTCCCATGC
GCATGTTCACGAGTTTTGCGCGGCAAAGTATGACAACACGTTTGTCACGTTTGTCAACGGGGAAACGCTGGAGCTGCCCG
TATCCATCTCATCTTTCGAAAACCAGGTTTACCGAACGGCATGGCTGAGAACAAAATTTATCGACAGGATTGAAGGAAAC
CCCATGCAGAAGAAACAGGAATTTATGCTCTATCCGAAAGAAGACCGGAATCAGCTGATATACGAATTCATCCTCAGGGA
GCTGAAAAAGCGCTATTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
68.617 |
97.917 |
0.672 |