Detailed information    

insolico Bioinformatically predicted

Overview


Name   comGG   Type   Machinery gene
Locus tag   ETT44_RS00690 Genome accession   NZ_CP035455
Coordinates   105196..105480 (+) Length   94 a.a.
NCBI ID   WP_136022021.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain emm197     
Function   dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 100196..110480
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ETT44_RS00655 (ETT44_00655) - 101447..101812 (+) 366 WP_002986560.1 DUF1033 family protein -
  ETT44_RS00660 (ETT44_00660) comGA 101905..102843 (+) 939 WP_002993471.1 competence type IV pilus ATPase ComGA Machinery gene
  ETT44_RS00665 (ETT44_00665) comGB 102779..103813 (+) 1035 WP_225793059.1 competence type IV pilus assembly protein ComGB Machinery gene
  ETT44_RS00670 (ETT44_00670) comGC 103815..104141 (+) 327 WP_136022022.1 competence type IV pilus major pilin ComGC Machinery gene
  ETT44_RS00675 (ETT44_00675) comGD 104116..104544 (+) 429 WP_023605232.1 competence type IV pilus minor pilin ComGD Machinery gene
  ETT44_RS00680 (ETT44_00680) comGE 104501..104785 (+) 285 WP_011284422.1 competence type IV pilus minor pilin ComGE Machinery gene
  ETT44_RS00685 (ETT44_00685) comGF 104778..105212 (+) 435 WP_002992738.1 competence type IV pilus minor pilin ComGF Machinery gene
  ETT44_RS00690 (ETT44_00690) comGG 105196..105480 (+) 285 WP_136022021.1 competence type IV pilus minor pilin ComGG Machinery gene
  ETT44_RS00695 (ETT44_00695) comGH 105620..106573 (+) 954 WP_111676999.1 class I SAM-dependent methyltransferase Machinery gene
  ETT44_RS00700 (ETT44_00700) - 106632..107828 (+) 1197 WP_010921803.1 acetate kinase -
  ETT44_RS00705 (ETT44_00705) - 108015..108323 (+) 309 WP_011284425.1 hypothetical protein -
  ETT44_RS00710 (ETT44_00710) proC 108406..109176 (-) 771 WP_002992745.1 pyrroline-5-carboxylate reductase -
  ETT44_RS00715 (ETT44_00715) pepA 109224..110291 (-) 1068 WP_136022020.1 glutamyl aminopeptidase -

Sequence


Protein


Download         Length: 94 a.a.        Molecular weight: 11174.23 Da        Isoelectric Point: 10.2654

>NTDB_id=303523 ETT44_RS00690 WP_136022021.1 105196..105480(+) (comGG) [Streptococcus pyogenes strain emm197]
MPFKTNLKAGILLYAMFMASIFLLVLQVYLSQVTALHKEYQAQTDYVKARLIAEIVYQDHRYKASNPVFFKGGQVIYRER
KERWMLIVKLDQQR

Nucleotide


Download         Length: 285 bp        

>NTDB_id=303523 ETT44_RS00690 WP_136022021.1 105196..105480(+) (comGG) [Streptococcus pyogenes strain emm197]
ATGCCTTTCAAGACTAATCTCAAAGCAGGCATCCTTTTGTATGCTATGTTTATGGCTAGTATTTTTTTGCTGGTTTTACA
GGTTTACCTTTCTCAAGTGACAGCTCTACACAAGGAATACCAAGCTCAAACTGACTATGTTAAAGCCCGACTGATAGCAG
AAATAGTTTATCAAGATCATAGATATAAAGCTTCTAATCCTGTCTTTTTTAAAGGTGGTCAAGTCATTTATCGAGAGCGA
AAAGAGAGATGGATGTTAATTGTTAAGTTAGATCAGCAACGATAG

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comGG Streptococcus mutans UA140

38.889

95.745

0.372

  comGG Streptococcus mutans UA159

38.889

95.745

0.372


Multiple sequence alignment