Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   DN407_RS05970 Genome accession   NZ_CP031068
Coordinates   1151045..1151728 (+) Length   227 a.a.
NCBI ID   WP_000350716.1    Uniprot ID   A0A9W5VN71
Organism   Bacillus sp. JAS24-2     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1146045..1156728
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DN407_RS05950 (DN407_05945) - 1147107..1148753 (+) 1647 WP_149216100.1 peptide ABC transporter substrate-binding protein -
  DN407_RS05955 (DN407_05950) - 1148783..1148986 (-) 204 WP_000559971.1 hypothetical protein -
  DN407_RS05960 (DN407_05955) spx 1149580..1149975 (+) 396 WP_000258267.1 transcriptional regulator Spx -
  DN407_RS05965 (DN407_05960) - 1150025..1150699 (-) 675 WP_000362615.1 TerC family protein -
  DN407_RS05970 (DN407_05965) mecA 1151045..1151728 (+) 684 WP_000350716.1 adaptor protein MecA Regulator
  DN407_RS05975 (DN407_05970) - 1151801..1153345 (+) 1545 WP_000799198.1 cardiolipin synthase -
  DN407_RS05980 (DN407_05975) - 1153426..1154670 (+) 1245 WP_149216101.1 competence protein CoiA family protein -
  DN407_RS05985 (DN407_05980) pepF 1154722..1156548 (+) 1827 WP_000003348.1 oligoendopeptidase F Regulator

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27009.07 Da        Isoelectric Point: 3.9986

>NTDB_id=303155 DN407_RS05970 WP_000350716.1 1151045..1151728(+) (mecA) [Bacillus sp. JAS24-2]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=303155 DN407_RS05970 WP_000350716.1 1151045..1151728(+) (mecA) [Bacillus sp. JAS24-2]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAGATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGGCAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAGCAAGAATTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAGTTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGAGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment