Detailed information NTG0302370

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: ETT56_RS00335
• Genome accession: NZ_CP035443
• Coordinates: 54393..55391 (+)
• Length: 332 a.a.
• NCBI ID: WP_014407198.1
• Uniprot ID: -
• Organism: Streptococcus pyogenes strain emm58
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 49393..60391

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ETT56_RS00320 (ETT56_00320)	-	50115..51812 (+)	1698	WP_063632921.1	AIPR family protein	-
ETT56_RS00325 (ETT56_00325)	purB	51830..53122 (+)	1293	WP_023079043.1	adenylosuccinate lyase	-
ETT56_RS00330 (ETT56_00330)	comR	53256..54167 (+)	912	WP_002986681.1	transcriptional regulator Rgg4/ComR	Regulator
ETT56_RS09980	comS	54251..54346 (+)	96	WP_198462994.1	quorum-sensing system DWW-type pheromone	Regulator
ETT56_RS00335 (ETT56_00335)	ruvB	54393..55391 (+)	999	WP_014407198.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
ETT56_RS00340 (ETT56_00340)	-	55529..55966 (+)	438	WP_023079047.1	low molecular weight protein-tyrosine-phosphatase	-
ETT56_RS00345 (ETT56_00345)	-	55989..56390 (+)	402	WP_032465955.1	MORN repeat-containing protein	-
ETT56_RS00350 (ETT56_00350)	-	56387..58162 (+)	1776	WP_023610835.1	acyltransferase family protein	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37581.11 Da
• Isoelectric Point: 5.3005

>NTDB_id=302370 ETT56_RS00335 WP_014407198.1 54393..55391(+) (ruvB) [Streptococcus pyogenes strain emm58]
MARILDNNVMGNEEFSDRTLRPQYLHEYIGQDKVKEQFAIFIEAAKRRDESLDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPAVEKAGDLVAILNELEPGDILFIDEIHRMPMSVEEVLYSAMEDFYIDIMIGAGDTSRSIHLDLPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYQEKDLTEIVERTATIFEIKIDHEAARKLACRSRGTPRIANRLLKRVRDYAQIIGDGIIT
SQITDRALTMLDVDREGLDYIDQKILRTMIEMYQGGPVGLGTLSVNIAEERNTVEEMYEPYLIQKGFLMRTRTGRVATQK
AYRHLGYPYQNT

Nucleotide

• Length: 999 bp

>NTDB_id=302370 ETT56_RS00335 WP_014407198.1 54393..55391(+) (ruvB) [Streptococcus pyogenes strain emm58]
ATGGCTAGAATTTTAGACAATAATGTAATGGGAAATGAGGAGTTTTCGGATCGGACTCTTCGCCCTCAATATCTACACGA
ATATATTGGACAAGATAAAGTTAAGGAACAATTCGCTATTTTTATAGAAGCAGCTAAAAGACGTGACGAATCTTTAGACC
ATGTTTTATTATTTGGACCTCCAGGACTGGGAAAAACAACAATGGCATTTGTGATTGCCAATGAATTGGGAGTTAATTTA
AAGCAAACTTCAGGTCCTGCCGTTGAGAAAGCTGGAGATTTAGTAGCTATTTTAAATGAATTAGAACCAGGGGATATTTT
GTTTATTGATGAAATTCACCGCATGCCAATGTCTGTCGAGGAAGTACTATATAGTGCTATGGAAGACTTCTATATTGATA
TTATGATTGGCGCTGGAGATACTAGTCGTAGTATTCATTTGGATCTGCCTCCATTTACATTGATTGGTGCTACTACACGT
GCAGGCATGTTATCTAATCCCCTCAGAGCTCGTTTTGGTATCACTGGTCACATGGAATACTATCAAGAAAAGGATTTGAC
AGAGATTGTGGAGCGTACAGCTACTATTTTTGAAATAAAAATAGACCATGAAGCTGCACGGAAATTAGCTTGTCGCAGTA
GAGGAACGCCCCGCATTGCTAATCGATTACTAAAACGAGTGCGTGACTATGCTCAAATTATTGGTGATGGCATCATAACG
TCTCAAATAACTGATAGAGCTTTGACTATGTTAGATGTTGACCGCGAAGGTCTCGATTACATTGATCAGAAAATTTTACG
AACGATGATTGAGATGTATCAGGGAGGACCAGTTGGTTTGGGGACATTATCTGTGAATATTGCCGAGGAGCGTAATACAG
TTGAAGAGATGTATGAACCCTACTTAATTCAAAAAGGCTTTCTCATGCGAACACGAACAGGTCGTGTAGCGACGCAAAAG
GCTTATCGTCATCTTGGCTATCCCTATCAAAACACTTAA

Domains

Predicted by InterProScan.

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae R6	84.848	99.398	0.843
ruvB	Streptococcus pneumoniae D39	84.848	99.398	0.843
ruvB	Streptococcus pneumoniae TIGR4	84.545	99.398	0.84
ruvB	Bacillus subtilis subsp. subtilis str. 168	58.824	97.289	0.572
ruvB	Helicobacter pylori 26695	48.936	99.096	0.485
ruvB	Synechocystis sp. PCC 6803	50.16	94.277	0.473