Detailed information NTG0299487

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: DP112_RS06985
• Genome accession: NZ_CP030125
• Coordinates: 1394803..1395744 (-)
• Length: 313 a.a.
• NCBI ID: WP_105135980.1
• Uniprot ID: -
• Organism: Streptococcus suis strain HA1003
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1389803..1400744

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DP112_RS06960 (DP112_06960)	prsA	1389910..1390908 (-)	999	WP_105135984.1	peptidylprolyl isomerase PrsA	-
DP112_RS06965 (DP112_06965)	-	1390971..1391690 (-)	720	WP_105136038.1	O-methyltransferase	-
DP112_RS06970 (DP112_06970)	-	1391765..1392313 (-)	549	WP_024384845.1	DUF6630 family protein	-
DP112_RS06975 (DP112_06975)	-	1392324..1392770 (-)	447	WP_114866655.1	hypothetical protein	-
DP112_RS06980 (DP112_06980)	pepF	1392772..1394574 (-)	1803	WP_105135981.1	oligoendopeptidase F	Regulator
DP112_RS06985 (DP112_06985)	coiA	1394803..1395744 (-)	942	WP_105135980.1	competence protein CoiA family protein	Machinery gene
DP112_RS06990 (DP112_06990)	metG	1395808..1397811 (-)	2004	WP_105138729.1	methionine--tRNA ligase	-
DP112_RS06995 (DP112_06995)	-	1398052..1398801 (-)	750	WP_114866656.1	hypothetical protein	-
DP112_RS07000 (DP112_07000)	-	1398883..1399494 (-)	612	WP_114866657.1	DUF3885 domain-containing protein	-
DP112_RS07005 (DP112_07005)	-	1399617..1400492 (+)	876	WP_114866658.1	type II CAAX endopeptidase family protein	-

Sequence

Protein

• Length: 313 a.a.
• Molecular weight: 36360.00 Da
• Isoelectric Point: 7.8677

>NTDB_id=299487 DP112_RS06985 WP_105135980.1 1394803..1395744(-) (coiA) [Streptococcus suis strain HA1003]
MLVALDEDGQVFNVLENPAPQGRYSCPGCGGLVRYKSGKVLRSHFAHVTLRDCTYFSENESAQHLSLKSCLYSWLINAEQ
VELEKCLPSIGQVADLFVNNSLALEVQCSSLPISRLQVRTQAYREAGLQVLWLLGKGLWLKERLSKLHKQFLSFSMNMGF
YLWELDDEKKELRLRYLIHEDLRGKVHCLTKVFPFGEGNLLEILRLPFAKQTLSHLTCPLDRDLPRYIAQQLYYKSPNWL
ALQAEFYSRGENLLTKAAEEWYPHIRLPRSAIGFAQIQKDLTLVYQDFDQYYDSIEDKQKQVLYPPIIYRKPM

Nucleotide

• Length: 942 bp

>NTDB_id=299487 DP112_RS06985 WP_105135980.1 1394803..1395744(-) (coiA) [Streptococcus suis strain HA1003]
ATGTTAGTTGCACTTGATGAAGATGGACAAGTTTTTAATGTCTTGGAAAATCCTGCGCCGCAAGGTCGCTATTCATGTCC
AGGTTGTGGAGGCTTGGTCCGATACAAATCCGGAAAAGTTCTGCGTTCGCACTTTGCCCACGTAACCCTGCGGGACTGCA
CATACTTTTCCGAGAATGAGTCGGCCCAGCACCTGTCCCTTAAGTCTTGTCTGTACAGTTGGTTAATCAATGCTGAACAA
GTTGAACTTGAAAAATGCCTGCCTAGTATAGGGCAGGTCGCTGATTTATTTGTTAATAATAGTCTAGCTTTGGAAGTACA
GTGTTCCAGTCTACCCATTTCTCGTTTGCAGGTGAGGACGCAAGCCTATCGTGAAGCTGGTCTTCAGGTTCTCTGGCTGT
TGGGAAAAGGCCTGTGGTTAAAAGAAAGATTAAGTAAATTACACAAGCAATTTCTCTCTTTTAGTATGAACATGGGTTTT
TACCTCTGGGAATTGGATGATGAGAAAAAAGAATTGCGTCTTCGTTACCTTATTCATGAAGACTTACGAGGTAAGGTCCA
CTGTCTGACAAAGGTTTTTCCATTTGGCGAGGGAAATTTATTGGAAATCTTGCGTCTGCCATTTGCCAAGCAAACATTAT
CGCATCTTACTTGCCCATTAGATAGGGATCTGCCTCGCTACATTGCTCAACAGCTTTATTACAAATCCCCCAATTGGTTA
GCCCTGCAGGCAGAGTTTTATAGCCGAGGGGAGAATTTGTTGACAAAGGCGGCAGAAGAATGGTATCCCCACATCCGTCT
GCCCCGCTCTGCCATTGGCTTTGCCCAAATACAAAAAGATTTAACCCTAGTTTATCAGGATTTTGACCAGTATTACGATA
GTATTGAAGACAAGCAGAAACAGGTTCTATATCCACCTATAATTTATAGAAAACCAATGTAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (21-221)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Streptococcus mitis NCTC 12261	54.167	99.681	0.54
coiA	Streptococcus pneumoniae TIGR4	52.244	99.681	0.521
coiA	Streptococcus pneumoniae Rx1	52.244	99.681	0.521
coiA	Streptococcus pneumoniae D39	52.244	99.681	0.521
coiA	Streptococcus pneumoniae R6	52.244	99.681	0.521
coiA	Lactococcus lactis subsp. cremoris KW2	41.562	100	0.425