Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   AB432_RS21510 Genome accession   NZ_CP030117
Coordinates   4435688..4435966 (+) Length   92 a.a.
NCBI ID   WP_048034008.1    Uniprot ID   A0A2Z4MLV2
Organism   Brevibacillus brevis strain DZQ7     
Function   degrading CSP; selective degradation of ComEA and ComEC (predicted from homology)   
Competence regulation

Genomic Context


Location: 4430688..4440966
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  AB432_RS21485 (AB432_021485) - 4431229..4431762 (-) 534 WP_048034003.1 PadR family transcriptional regulator -
  AB432_RS31155 - 4432213..4432470 (+) 258 Protein_4156 S1C family serine protease -
  AB432_RS21495 (AB432_021495) - 4432502..4433575 (-) 1074 WP_048034005.1 YheC/YheD family protein -
  AB432_RS21500 (AB432_021500) - 4433778..4434098 (+) 321 WP_048034006.1 winged helix-turn-helix transcriptional regulator -
  AB432_RS21505 (AB432_021505) - 4434211..4435665 (+) 1455 WP_048034007.1 recombinase family protein -
  AB432_RS21510 (AB432_021510) htrA 4435688..4435966 (+) 279 WP_048034008.1 S1C family serine protease Regulator
  AB432_RS30890 - 4435997..4436143 (-) 147 WP_017250462.1 hypothetical protein -
  AB432_RS21515 (AB432_021515) - 4436208..4436489 (-) 282 WP_007721245.1 DUF2325 domain-containing protein -
  AB432_RS21520 (AB432_021520) - 4436822..4437421 (+) 600 WP_048034009.1 IMEF encapsulin system ferritin-like cargo protein -
  AB432_RS21525 (AB432_021525) - 4437459..4438307 (+) 849 WP_007721249.1 family 1 encapsulin nanocompartment shell protein -
  AB432_RS21530 (AB432_021530) - 4438451..4439269 (+) 819 WP_048034010.1 alpha/beta fold hydrolase -
  AB432_RS21535 (AB432_021535) - 4439324..4440532 (-) 1209 WP_048034011.1 PLP-dependent aminotransferase family protein -

Sequence


Protein


Download         Length: 92 a.a.        Molecular weight: 9801.29 Da        Isoelectric Point: 6.1950

>NTDB_id=299392 AB432_RS21510 WP_048034008.1 4435688..4435966(+) (htrA) [Brevibacillus brevis strain DZQ7]
MTTGGSPLGLENSVTAGIISAKNRRLQVAKRMYEEIFQTDAAINPGNSGGPLINLNGEVVGLNAFIIQSSQCLGFAIGID
ALKMQLEQYVFK

Nucleotide


Download         Length: 279 bp        

>NTDB_id=299392 AB432_RS21510 WP_048034008.1 4435688..4435966(+) (htrA) [Brevibacillus brevis strain DZQ7]
ATGACGACAGGTGGTTCCCCACTTGGTTTGGAAAATTCTGTGACAGCGGGGATCATTAGTGCCAAAAACCGCCGCTTACA
GGTTGCGAAGCGAATGTACGAAGAAATTTTTCAGACGGATGCTGCGATTAACCCAGGAAATAGCGGAGGTCCACTCATTA
ATTTGAATGGGGAAGTCGTTGGTCTCAATGCATTCATCATTCAATCGAGCCAATGCTTGGGCTTCGCCATCGGGATTGAC
GCCCTTAAAATGCAACTGGAGCAATACGTATTTAAGTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2Z4MLV2

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus pneumoniae Rx1

46.939

100

0.5

  htrA Streptococcus pneumoniae D39

46.939

100

0.5

  htrA Streptococcus pneumoniae R6

46.939

100

0.5

  htrA Streptococcus pneumoniae TIGR4

46.939

100

0.5

  htrA Streptococcus mitis NCTC 12261

46.939

100

0.5

  htrA Streptococcus mutans UA159

47.727

95.652

0.457

  htrA Streptococcus gordonii str. Challis substr. CH1

41.237

100

0.435


Multiple sequence alignment