Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   A7J09_RS01330 Genome accession   NZ_CP030015
Coordinates   255093..255815 (+) Length   240 a.a.
NCBI ID   WP_029178512.1    Uniprot ID   -
Organism   Streptococcus suis strain ISU2812     
Function   degradation of ComW (predicted from homology)   
Competence regulation

Genomic Context

Location: 250093..260815
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A7J09_RS01310 (A7J09_01320) - 250372..251627 (+) 1256 WP_172411187.1 ISL3 family transposase -
  A7J09_RS01315 (A7J09_01325) - 251701..252444 (-) 744 WP_024389055.1 amino acid ABC transporter ATP-binding protein -
  A7J09_RS01320 (A7J09_01330) - 252437..254002 (-) 1566 WP_029178513.1 ABC transporter substrate-binding protein/permease -
  A7J09_RS01325 (A7J09_01335) - 254129..254965 (+) 837 WP_015647359.1 undecaprenyl-diphosphate phosphatase -
  A7J09_RS01330 (A7J09_01340) mecA 255093..255815 (+) 723 WP_029178512.1 adaptor protein MecA Regulator
  A7J09_RS01335 (A7J09_01345) - 255812..256984 (+) 1173 WP_029178511.1 glycosyltransferase family 4 protein -
  A7J09_RS01340 (A7J09_01350) sufC 257654..258427 (+) 774 WP_024376584.1 Fe-S cluster assembly ATPase SufC -
  A7J09_RS01345 (A7J09_01355) sufD 258444..259706 (+) 1263 WP_029174652.1 Fe-S cluster assembly protein SufD -

Sequence

Protein


Download         Length: 240 a.a.        Molecular weight: 28037.55 Da        Isoelectric Point: 4.0497

>NTDB_id=298250 A7J09_RS01330 WP_029178512.1 255093..255815(+) (mecA) [Streptococcus suis strain ISU2812]
MKVKQISDSTLKITIKLDDLEERGMELSDFLIPQEKTEEFFYTVLDELDLPMTFRESGMLSFRVTPKPDRVDIFVTKSDL
DQSLNFDEFTDFSELGDVASMTPDEFFKSLEQTVREKSTPDATAVRHLEEVEQEEEADEEEQERYIYYILEFPTIEDLFT
FVGTVDYPVEESELYKMDGHYYLTVLINVENRSKQYPGYILSRMLEFTNDTKLTRPALQEHGTLMLPLAAIEELRKVPTV

Nucleotide


Download         Length: 723 bp        

>NTDB_id=298250 A7J09_RS01330 WP_029178512.1 255093..255815(+) (mecA) [Streptococcus suis strain ISU2812]
ATGAAAGTAAAGCAAATTAGTGATTCAACCTTGAAAATCACTATAAAATTAGATGATTTGGAAGAGAGAGGAATGGAACT
TTCGGACTTTCTCATTCCGCAAGAAAAGACAGAGGAGTTCTTCTATACTGTTTTGGATGAATTGGATTTACCAATGACTT
TTCGAGAAAGTGGTATGCTGAGTTTTCGTGTGACTCCGAAGCCAGATCGGGTAGACATCTTTGTTACCAAATCTGATTTG
GATCAGAGCTTGAATTTCGATGAATTTACAGATTTTTCGGAACTTGGTGATGTTGCAAGTATGACTCCAGATGAGTTTTT
CAAGAGTTTGGAGCAAACCGTTCGTGAGAAAAGCACACCGGATGCAACAGCCGTTCGTCATTTGGAAGAGGTAGAGCAAG
AGGAAGAAGCAGATGAAGAGGAGCAGGAGCGCTATATTTACTACATTTTGGAATTTCCAACGATAGAGGATCTGTTTACT
TTTGTTGGTACGGTTGATTATCCAGTAGAAGAATCGGAATTATATAAAATGGATGGTCACTACTACTTGACCGTTCTTAT
CAATGTAGAAAATCGTTCCAAGCAGTATCCAGGCTACATTCTCTCACGAATGTTGGAATTTACCAATGATACTAAGTTGA
CCAGACCTGCTTTACAAGAACACGGAACTTTGATGCTTCCGCTTGCGGCAATCGAGGAGCTTAGGAAGGTTCCGACAGTA
TGA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-234)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus pneumoniae Rx1

51.23

100

0.521
  mecA Streptococcus pneumoniae D39

51.23

100

0.521
  mecA Streptococcus pneumoniae R6

51.23

100

0.521
  mecA Streptococcus pneumoniae TIGR4

51.23

100

0.521
  mecA Streptococcus mutans UA159

49.59

100

0.504
  mecA Streptococcus thermophilus LMD-9

47.083

100

0.471
  mecA Streptococcus thermophilus LMG 18311

46.667

100

0.467

Multiple sequence alignment