Detailed information NTG0297089

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: EQH23_RS06195
• Genome accession: NZ_CP035257
• Coordinates: 1248714..1249283 (-)
• Length: 189 a.a.
• NCBI ID: WP_078791811.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901928
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1243714..1254283

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH23_RS06165 (EQH23_06510)	-	1244046..1244981 (+)	936	WP_000401779.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	-
EQH23_RS06170 (EQH23_06515)	-	1245077..1245319 (+)	243	WP_000710764.1	type B 50S ribosomal protein L31	-
EQH23_RS06175 (EQH23_06520)	-	1245376..1245594 (-)	219	WP_000028150.1	hypothetical protein	-
EQH23_RS06180 (EQH23_06525)	-	1245591..1246342 (-)	752	Protein_1237	transposase	-
EQH23_RS06185 (EQH23_06530)	gdhA	1246679..1248025 (+)	1347	WP_000199560.1	NADP-specific glutamate dehydrogenase	-
EQH23_RS06190 (EQH23_06540)	-	1248531..1248701 (-)	171	WP_000711943.1	hypothetical protein	-
EQH23_RS06195 (EQH23_06545)	comA/nlmT	1248714..1249283 (-)	570	WP_078791811.1	ATP-binding cassette domain-containing protein	Regulator
EQH23_RS06200 (EQH23_06550)	-	1249309..1250112 (-)	804	Protein_1241	IS5 family transposase	-
EQH23_RS06205 (EQH23_06565)	-	1250205..1250867 (-)	663	Protein_1242	IS66 family transposase	-
EQH23_RS06210 (EQH23_06570)	-	1250973..1251416 (-)	444	Protein_1243	IS66 family transposase	-
EQH23_RS06215 (EQH23_06575)	-	1251389..1251697 (+)	309	Protein_1244	transposase	-
EQH23_RS06220 (EQH23_06580)	tnpB	1251834..1252100 (-)	267	WP_001248801.1	IS66 family insertion sequence element accessory protein TnpB	-
EQH23_RS06225 (EQH23_06585)	-	1252138..1252323 (-)	186	WP_001136124.1	hypothetical protein	-
EQH23_RS06230 (EQH23_06595)	-	1252596..1253207 (-)	612	WP_000251935.1	V-type ATP synthase subunit D	-

Sequence

Protein

• Length: 189 a.a.
• Molecular weight: 21209.60 Da
• Isoelectric Point: 8.4353

>NTDB_id=297089 EQH23_RS06195 WP_078791811.1 1248714..1249283(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_1901928]
MPSRLYKIDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKHEVTSQKIEEVCKAVQIYDEIMAMPMK
FNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIQSQGCTQIIVAHRLSTIKDADVIFVM
KGGKIVESGNHKYLMDLGGEYYSLYTKRK

Nucleotide

• Length: 570 bp

>NTDB_id=297089 EQH23_RS06195 WP_078791811.1 1248714..1249283(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_1901928]
ATACCATCAAGATTATATAAGATTGATACAGGAAAAGTTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAAT
ATTAAGTCAAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAATATAACTTTAAAGC
ACGAAGTTACTTCACAAAAGATAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAA
TTTAATACTATCATCTCAGAGATGGGGTCAAATATTTCAGGTGGGCAAAGGCAACGGATAGCACTGGCACGTGCATTAAT
AAATAATCCTAGTATTGTAATTTTAGATGAAGCAACTAGTGCATTAGACACTATTAATGAGGAAAGAATAACAAAGTATA
TACAAAGTCAGGGCTGTACTCAAATAATTGTAGCTCATAGATTGTCAACGATTAAGGATGCGGATGTTATTTTTGTAATG
AAAGGTGGTAAGATTGTTGAGTCAGGAAATCATAAGTACTTAATGGATCTTGGTGGAGAGTACTACAGCTTATATACAAA
AAGGAAATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (4-120)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	42.391	97.354	0.413
comA	Streptococcus gordonii str. Challis substr. CH1	41.489	99.471	0.413
comA	Streptococcus mitis NCTC 12261	41.935	98.413	0.413
comA	Streptococcus mitis SK321	41.398	98.413	0.407
comA	Streptococcus pneumoniae D39	40.86	98.413	0.402
comA	Streptococcus pneumoniae Rx1	40.86	98.413	0.402
comA	Streptococcus pneumoniae R6	40.86	98.413	0.402
comA	Streptococcus pneumoniae TIGR4	39.785	98.413	0.392
rcrQ	Streptococcus mutans UA159	36.508	100	0.365