Detailed information NTG0296339

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: EQH32_RS05005
• Genome accession: NZ_CP035248
• Coordinates: 979456..980067 (+)
• Length: 203 a.a.
• NCBI ID: WP_061642211.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901939
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 974456..985067

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH32_RS04970 (EQH32_05235)	-	975057..976139 (+)	1083	Protein_996	alpha amylase N-terminal ig-like domain-containing protein	-
EQH32_RS10840 (EQH32_05245)	-	976133..977037 (+)	905	Protein_997	relaxase	-
EQH32_RS10960 (EQH32_05250)	-	977034..977210 (-)	177	Protein_998	helix-turn-helix domain-containing protein	-
EQH32_RS04990	-	977290..977352 (+)	63	WP_133457516.1	SHP2/SHP3 family peptide pheromone	-
EQH32_RS04995	-	977628..977981 (+)	354	WP_231633727.1	lanthionine synthetase LanC family protein	-
EQH32_RS05000 (EQH32_05260)	-	977974..979287 (+)	1314	WP_000197306.1	cysteine peptidase family C39 domain-containing protein	-
EQH32_RS05005 (EQH32_05265)	comA	979456..980067 (+)	612	WP_061642211.1	ATP-binding cassette domain-containing protein	Regulator
EQH32_RS05010 (EQH32_05270)	-	980110..980280 (+)	171	WP_000757486.1	hypothetical protein	-
EQH32_RS05015 (EQH32_05275)	-	980314..981042 (+)	729	WP_001018881.1	ABC transporter ATP-binding protein	-
EQH32_RS05020 (EQH32_05280)	-	981035..981772 (+)	738	WP_000593057.1	ABC transporter permease	-
EQH32_RS05025 (EQH32_05285)	-	981785..982495 (+)	711	WP_000771192.1	hypothetical protein	-
EQH32_RS05030 (EQH32_05290)	-	983038..983259 (+)	222	WP_000286251.1	helix-turn-helix domain-containing protein	-
EQH32_RS05035 (EQH32_05300)	-	983705..984015 (+)	311	Protein_1008	transposase family protein	-

Sequence

Protein

• Length: 203 a.a.
• Molecular weight: 22222.80 Da
• Isoelectric Point: 7.8446

>NTDB_id=296339 EQH32_RS05005 WP_061642211.1 979456..980067(+) (comA) [Streptococcus pneumoniae strain TVO_1901939]
MTIEPGQRIALVGQSGSGKSTLSKILSGLYKIDTGKILFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKNEV
TSQKIEEVCKAVQIYDEIMAMPMKFNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIQS
QGCTQIIIAHRLSTIKDADIIFVMKGGKIVESGNHKYLMDLGG

Nucleotide

• Length: 612 bp

>NTDB_id=296339 EQH32_RS05005 WP_061642211.1 979456..980067(+) (comA) [Streptococcus pneumoniae strain TVO_1901939]
TTGACTATTGAGCCAGGACAGAGAATTGCACTAGTCGGTCAATCGGGGTCAGGAAAAAGTACGTTATCAAAAATACTATC
AGGATTATATAAGATTGATACAGGAAAAATTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAATATTAAGTC
AAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAATATAACTTTAAAGAACGAAGTT
ACTTCACAAAAGATAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAATTTAATAC
TATCATCTCAGAGATGGGGTCAAATATTTCAGGTGGGCAAAGGCAACGGATAGCACTGGCACGTGCATTAATAAATAATC
CTAGTATTGTAATTTTAGATGAAGCAACTAGTGCATTAGACACTATTAATGAGGAAAGAATAACAAAGTATATACAAAGT
CAGGGTTGTACTCAAATAATTATAGCTCATAGATTGTCAACGATTAAGGATGCGGATATTATTTTTGTAATGAAAGGTGG
TAAGATTGTTGAGTCAGGAAATCATAAGTACTTAATGGATCTTGGTGGATAG

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (1-144)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	44.39	100	0.448
comA	Streptococcus mitis SK321	43.902	100	0.443
comA	Streptococcus gordonii str. Challis substr. CH1	42.995	100	0.438
comA	Streptococcus pneumoniae R6	42.927	100	0.433
comA	Streptococcus pneumoniae Rx1	42.927	100	0.433
comA	Streptococcus pneumoniae D39	42.927	100	0.433
comA	Streptococcus pneumoniae TIGR4	41.951	100	0.424
comA/nlmT	Streptococcus mutans UA159	42.079	99.507	0.419
rcrQ	Streptococcus mutans UA159	37.438	100	0.374