Detailed information NTG0295997

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: EQH35_RS06090
• Genome accession: NZ_CP035245
• Coordinates: 1195162..1195731 (-)
• Length: 189 a.a.
• NCBI ID: WP_073177105.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_1901943
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1190162..1200731

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH35_RS06060 (EQH35_06380)	-	1190480..1191415 (+)	936	WP_000401770.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	-
EQH35_RS06065 (EQH35_06385)	-	1191511..1191753 (+)	243	WP_000710764.1	type B 50S ribosomal protein L31	-
EQH35_RS06070 (EQH35_06390)	-	1191810..1192028 (-)	219	WP_000028151.1	hypothetical protein	-
EQH35_RS06075 (EQH35_06395)	-	1192025..1192601 (-)	577	Protein_1221	transposase	-
EQH35_RS06080 (EQH35_06400)	gdhA	1193137..1194483 (+)	1347	WP_000199536.1	NADP-specific glutamate dehydrogenase	-
EQH35_RS06085 (EQH35_06410)	-	1194979..1195149 (-)	171	WP_000711943.1	hypothetical protein	-
EQH35_RS06090 (EQH35_06415)	comA	1195162..1195731 (-)	570	WP_073177105.1	ATP-binding cassette domain-containing protein	Regulator
EQH35_RS06095 (EQH35_06420)	-	1195757..1196565 (-)	809	Protein_1225	IS5 family transposase	-
EQH35_RS10645	-	1196821..1196970 (+)	150	WP_001838451.1	hypothetical protein	-
EQH35_RS10650	-	1197061..1197327 (+)	267	WP_000215370.1	winged helix-turn-helix domain-containing protein	-
EQH35_RS10655	-	1197215..1197772 (+)	558	WP_255296925.1	IS630 family transposase	-
EQH35_RS06105 (EQH35_06440)	-	1198101..1198553 (-)	453	Protein_1229	hypothetical protein	-
EQH35_RS06110 (EQH35_06445)	-	1198555..1198842 (-)	288	WP_000869751.1	hypothetical protein	-
EQH35_RS06115 (EQH35_06455)	-	1199636..1199773 (-)	138	WP_000807141.1	hypothetical protein	-

Sequence

Protein

• Length: 189 a.a.
• Molecular weight: 21076.50 Da
• Isoelectric Point: 8.4331

>NTDB_id=295997 EQH35_RS06090 WP_073177105.1 1195162..1195731(-) (comA) [Streptococcus pneumoniae strain TVO_1901943]
MPSGLYKIDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKHEVTSQKIEEVCKAVQIYDEIMAMPMK
FNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIKSQGCTQIIVAHRLSTIKDADIIVVM
KGGKIVESGNHKYLMDLGGEYYSLYTKRK

Nucleotide

• Length: 570 bp

>NTDB_id=295997 EQH35_RS06090 WP_073177105.1 1195162..1195731(-) (comA) [Streptococcus pneumoniae strain TVO_1901943]
ATACCATCAGGATTATATAAGATTGATACAGGAAAAGTTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAAT
ATTAAGTCAAAATTTAGGAGTAGTTCCACAGGATTCGTTTTTATTGAACAGAAGTATTCTTGATAACATAACTTTAAAGC
ACGAAGTTACTTCACAAAAGATAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAA
TTTAATACTATCATCTCAGAGATGGGTTCAAATATTTCAGGTGGTCAAAGACAACGGATAGCACTGGCACGTGCATTAAT
AAATAATCCTAGTATTGTAATTTTAGATGAAGCAACTAGTGCTTTAGACACTATTAATGAGGAAAGAATAACAAAGTATA
TAAAAAGTCAGGGCTGTACTCAAATAATTGTAGCTCATAGATTGTCAACGATTAAGGATGCGGATATTATTGTTGTAATG
AAAGGTGGTAAGATTGTTGAGTCAGGAAATCATAAGTACTTAATGGATCTTGGTGGAGAGTACTACAGCTTATATACAAA
AAGGAAATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (3-120)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus mitis NCTC 12261	42.473	98.413	0.418
comA	Streptococcus gordonii str. Challis substr. CH1	42.391	97.354	0.413
comA	Streptococcus mitis SK321	41.935	98.413	0.413
comA/nlmT	Streptococcus mutans UA159	41.848	97.354	0.407
comA	Streptococcus pneumoniae R6	41.398	98.413	0.407
comA	Streptococcus pneumoniae D39	41.398	98.413	0.407
comA	Streptococcus pneumoniae Rx1	41.398	98.413	0.407
comA	Streptococcus pneumoniae TIGR4	40.323	98.413	0.397