Detailed information NTG0295403

Bioinformatically predicted

Overview

• Name: comA/nlmT
• Type: Regulator
• Locus tag: EQH41_RS06090
• Genome accession: NZ_CP035239
• Coordinates: 1234900..1235469 (-)
• Length: 189 a.a.
• NCBI ID: WP_078791811.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain TVO_TIGR4
• Function: transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1229900..1240469

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQH41_RS06060 (EQH41_06415)	-	1230232..1231167 (+)	936	WP_000401779.1	bifunctional oligoribonuclease/PAP phosphatase NrnA	-
EQH41_RS06065 (EQH41_06420)	-	1231263..1231505 (+)	243	WP_000710764.1	type B 50S ribosomal protein L31	-
EQH41_RS06070 (EQH41_06425)	-	1231562..1231780 (-)	219	WP_000028150.1	hypothetical protein	-
EQH41_RS06075 (EQH41_06430)	-	1231777..1232528 (-)	752	Protein_1222	transposase	-
EQH41_RS06080 (EQH41_06435)	gdhA	1232865..1234211 (+)	1347	WP_000199560.1	NADP-specific glutamate dehydrogenase	-
EQH41_RS06085 (EQH41_06445)	-	1234717..1234887 (-)	171	WP_000711943.1	hypothetical protein	-
EQH41_RS06090 (EQH41_06450)	comA/nlmT	1234900..1235469 (-)	570	WP_078791811.1	ATP-binding cassette domain-containing protein	Regulator
EQH41_RS06095 (EQH41_06455)	-	1235495..1236298 (-)	804	Protein_1226	IS5 family transposase	-
EQH41_RS06100 (EQH41_06470)	-	1236391..1237053 (-)	663	Protein_1227	IS66 family transposase	-
EQH41_RS06105 (EQH41_06475)	-	1237159..1237602 (-)	444	Protein_1228	IS66 family transposase	-
EQH41_RS06110 (EQH41_06480)	-	1237575..1237883 (+)	309	Protein_1229	transposase	-
EQH41_RS06115 (EQH41_06485)	tnpB	1238038..1238361 (-)	324	WP_000152337.1	IS66 family insertion sequence element accessory protein TnpB	-
EQH41_RS06120 (EQH41_06490)	-	1238342..1238527 (-)	186	WP_001136124.1	hypothetical protein	-
EQH41_RS06125 (EQH41_06500)	-	1238800..1239411 (-)	612	WP_000251935.1	V-type ATP synthase subunit D	-

Sequence

Protein

• Length: 189 a.a.
• Molecular weight: 21209.60 Da
• Isoelectric Point: 8.4353

>NTDB_id=295403 EQH41_RS06090 WP_078791811.1 1234900..1235469(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_TIGR4]
MPSRLYKIDTGKVLFDGVNINQIDKKILSQNLGVVPQDSFLLNRSILDNITLKHEVTSQKIEEVCKAVQIYDEIMAMPMK
FNTIISEMGSNISGGQRQRIALARALINNPSIVILDEATSALDTINEERITKYIQSQGCTQIIVAHRLSTIKDADVIFVM
KGGKIVESGNHKYLMDLGGEYYSLYTKRK

Nucleotide

• Length: 570 bp

>NTDB_id=295403 EQH41_RS06090 WP_078791811.1 1234900..1235469(-) (comA/nlmT) [Streptococcus pneumoniae strain TVO_TIGR4]
ATACCATCAAGATTATATAAGATTGATACAGGAAAAGTTTTATTTGATGGTGTAAATATTAATCAAATAGATAAAAAAAT
ATTAAGTCAAAATTTAGGAGTAGTTCCACAGGATTCATTTTTATTGAACCGAAGTATTCTTGATAATATAACTTTAAAGC
ACGAAGTTACTTCACAAAAGATAGAGGAAGTTTGTAAAGCAGTTCAAATCTATGATGAAATCATGGCTATGCCGATGAAA
TTTAATACTATCATCTCAGAGATGGGGTCAAATATTTCAGGTGGGCAAAGGCAACGGATAGCACTGGCACGTGCATTAAT
AAATAATCCTAGTATTGTAATTTTAGATGAAGCAACTAGTGCATTAGACACTATTAATGAGGAAAGAATAACAAAGTATA
TACAAAGTCAGGGCTGTACTCAAATAATTGTAGCTCATAGATTGTCAACGATTAAGGATGCGGATGTTATTTTTGTAATG
AAAGGTGGTAAGATTGTTGAGTCAGGAAATCATAAGTACTTAATGGATCTTGGTGGAGAGTACTACAGCTTATATACAAA
AAGGAAATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (4-120)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/nlmT	Streptococcus mutans UA159	42.391	97.354	0.413
comA	Streptococcus gordonii str. Challis substr. CH1	41.489	99.471	0.413
comA	Streptococcus mitis NCTC 12261	41.935	98.413	0.413
comA	Streptococcus mitis SK321	41.398	98.413	0.407
comA	Streptococcus pneumoniae D39	40.86	98.413	0.402
comA	Streptococcus pneumoniae Rx1	40.86	98.413	0.402
comA	Streptococcus pneumoniae R6	40.86	98.413	0.402
comA	Streptococcus pneumoniae TIGR4	39.785	98.413	0.392
rcrQ	Streptococcus mutans UA159	36.508	100	0.365