Detailed information    

insolico Bioinformatically predicted

Overview

Name   agrA   Type   Regulator
Locus tag   CSB81_RS03665 Genome accession   NZ_CP029667
Coordinates   662361..663077 (-) Length   238 a.a.
NCBI ID   WP_000688492.1    Uniprot ID   A0A7U7IEW1
Organism   Staphylococcus aureus strain AR_0225     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 657361..668077
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSB81_RS03645 (CSB81_0628) - 658455..659405 (+) 951 WP_000790330.1 LacI family DNA-binding transcriptional regulator -
  CSB81_RS03650 (CSB81_0629) - 659554..661038 (+) 1485 WP_000141414.1 sucrose-6-phosphate hydrolase -
  CSB81_RS03655 (CSB81_0630) - 661035..661994 (+) 960 WP_001253312.1 carbohydrate kinase -
  CSB81_RS03660 - 662182..662289 (-) 108 WP_001790167.1 hypothetical protein -
  CSB81_RS03665 (CSB81_0631) agrA 662361..663077 (-) 717 WP_000688492.1 LytTR family DNA-binding domain-containing protein Regulator
  CSB81_RS03670 - 663096..664388 (-) 1293 WP_001549202.1 GHKL domain-containing protein -
  CSB81_RS03675 (CSB81_0633) - 664413..664553 (-) 141 WP_001093929.1 cyclic lactone autoinducer peptide -
  CSB81_RS03680 (CSB81_0634) agrB 664550..665119 (-) 570 WP_001105707.1 accessory gene regulator AgrB -
  CSB81_RS15620 hld 665409..665489 (+) 81 WP_000046022.1 delta-hemolysin -
  CSB81_RS03690 (CSB81_0636) - 666086..666871 (-) 786 WP_000867960.1 carbon-nitrogen family hydrolase -
  CSB81_RS03695 (CSB81_0637) - 667232..667858 (-) 627 WP_000522384.1 nitroreductase family protein -

Sequence

Protein


Download         Length: 238 a.a.        Molecular weight: 27905.90 Da        Isoelectric Point: 6.0927

>NTDB_id=294868 CSB81_RS03665 WP_000688492.1 662361..663077(-) (agrA) [Staphylococcus aureus strain AR_0225]
MKIFICEDDPKQRENMVTIIKNYIMIEEKPMEIALATDNPYEVLEQAKNMNDIGCYFLDIQLSTDINGIKLGSEIRKHDP
VGNIIFVTSHSELTYLTFVYKVAAMDFIFKDDPAELRTRIIDCLETAHTRLQLLSKDNSVETIELKRGSNSVYVQYDDIM
FFESSTKSHRLIAHLDNRQIEFYGNLKELSQLDDRFFRCHNSFVVNRHNIESIDSKERIVYFKNKEHCYASVRNVKKI

Nucleotide


Download         Length: 717 bp        

>NTDB_id=294868 CSB81_RS03665 WP_000688492.1 662361..663077(-) (agrA) [Staphylococcus aureus strain AR_0225]
ATGAAAATTTTCATTTGCGAAGACGATCCAAAACAAAGAGAAAACATGGTTACCATTATTAAAAATTATATAATGATAGA
AGAAAAGCCTATGGAAATTGCCCTCGCAACTGATAATCCTTATGAGGTGCTTGAGCAAGCTAAAAATATGAATGACATAG
GCTGTTACTTTTTAGATATTCAACTTTCAACTGATATTAATGGTATCAAATTAGGCAGTGAAATTCGTAAGCATGACCCA
GTTGGTAACATTATTTTCGTTACGAGTCACAGTGAACTTACCTATTTAACATTTGTCTACAAAGTTGCAGCGATGGATTT
TATTTTTAAAGATGATCCAGCTGAATTAAGAACTCGAATTATAGACTGTTTAGAAACTGCACATACACGCTTACAATTGT
TGTCTAAAGATAATAGCGTTGAAACGATTGAATTAAAACGTGGCAGTAATTCAGTGTATGTTCAATATGATGATATTATG
TTTTTTGAATCATCAACAAAATCTCACAGACTCATTGCCCATTTAGATAACCGTCAAATTGAATTTTATGGTAATTTAAA
AGAACTGAGTCAATTAGATGATCGTTTCTTTAGATGTCATAATAGCTTTGTCGTCAATCGCCATAATATTGAATCTATAG
ATTCGAAAGAGCGAATTGTCTATTTTAAAAATAAAGAACACTGCTATGCATCGGTGAGAAACGTTAAAAAAATATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(3-120)

LytTr DNA-binding domain (LytTR)

(151-237)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7IEW1

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  agrA Staphylococcus aureus N315

100

100

1

Multiple sequence alignment