Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | SPN23F_RS00140 | Genome accession | NC_011900 |
| Coordinates | 23778..24014 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939545.1 | Uniprot ID | A0A0H2ZMA7 |
| Organism | Streptococcus pneumoniae ATCC 700669 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 18778..29014
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPN23F_RS11705 (SPN23F00170) | - | 21834..22680 (+) | 847 | Protein_15 | IS630 family transposase | - |
| SPN23F_RS11710 (SPN23F00190) | - | 22715..23512 (-) | 798 | Protein_16 | transposase | - |
| SPN23F_RS00140 (SPN23F00220) | comW | 23778..24014 (+) | 237 | WP_000939545.1 | sigma(X)-activator ComW | Regulator |
| SPN23F_RS00145 (SPN23F00230) | - | 24245..25531 (+) | 1287 | WP_000205044.1 | adenylosuccinate synthase | - |
| SPN23F_RS00150 (SPN23F00240) | tadA | 25732..26199 (+) | 468 | WP_000291870.1 | tRNA adenosine(34) deaminase TadA | - |
| SPN23F_RS13665 | - | 26408..27106 (-) | 699 | WP_001106362.1 | tyrosine-type recombinase/integrase | - |
| SPN23F_RS13670 | - | 27196..27549 (-) | 354 | WP_001814135.1 | hypothetical protein | - |
| SPN23F_RS00165 (SPN23F00270) | - | 27604..28674 (-) | 1071 | WP_000401841.1 | type I restriction endonuclease | - |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9658.13 Da Isoelectric Point: 6.7051
>NTDB_id=29428 SPN23F_RS00140 WP_000939545.1 23778..24014(+) (comW) [Streptococcus pneumoniae ATCC 700669]
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=29428 SPN23F_RS00140 WP_000939545.1 23778..24014(+) (comW) [Streptococcus pneumoniae ATCC 700669]
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGGTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGGTTTATTTCTTGTTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comW | Streptococcus mitis SK321 |
75.641 |
100 |
0.756 |
| comW | Streptococcus mitis NCTC 12261 |
75.325 |
98.718 |
0.744 |