Detailed information NTG0294169

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: DLK06_RS01635
• Genome accession: NZ_CP029610
• Coordinates: 338065..339123 (+)
• Length: 352 a.a.
• NCBI ID: WP_005067078.1
• Uniprot ID: -
• Organism: Acinetobacter pittii strain ST220
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 333065..344123

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DLK06_RS01620 (DLK06_01620)	-	334167..334499 (+)	333	WP_002116981.1	DUF7709 family protein	-
DLK06_RS01625 (DLK06_01625)	rrmA	334502..335326 (+)	825	WP_080777164.1	putative RNA methyltransferase	-
DLK06_RS01630 (DLK06_01630)	ponA	335342..337903 (-)	2562	WP_032057246.1	penicillin-binding protein PBP1a	-
DLK06_RS01635 (DLK06_01635)	pilM	338065..339123 (+)	1059	WP_005067078.1	pilus assembly protein PilM	Machinery gene
DLK06_RS01640 (DLK06_01640)	pilN	339123..339764 (+)	642	WP_002116944.1	PilN domain-containing protein	Machinery gene
DLK06_RS01645 (DLK06_01645)	pilO	339761..340540 (+)	780	WP_032057248.1	type 4a pilus biogenesis protein PilO	Machinery gene
DLK06_RS01650 (DLK06_01650)	pilP	340552..341079 (+)	528	WP_005067086.1	pilus assembly protein PilP	Machinery gene
DLK06_RS01655 (DLK06_01655)	pilQ	341142..343307 (+)	2166	WP_032063183.1	type IV pilus secretin PilQ	Machinery gene
DLK06_RS01660 (DLK06_01660)	aroK	343319..343888 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39068.65 Da
• Isoelectric Point: 4.4657

>NTDB_id=294169 DLK06_RS01635 WP_005067078.1 338065..339123(+) (pilM) [Acinetobacter pittii strain ST220]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=294169 DLK06_RS01635 WP_005067078.1 338065..339123(+) (pilM) [Acinetobacter pittii strain ST220]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TCTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTG
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTCGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATCGGCCATACCATGACCACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTGTTTGGCGGTAAACAGCTTACTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GTAATGCCAACATTCCAGGGCTTGCTAAATTGTTGCAGCAAAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.307	100	0.963
comM	Acinetobacter nosocomialis M2	96.307	100	0.963
comM	Acinetobacter baylyi ADP1	81.25	100	0.813
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42