Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | DLK06_RS01640 | Genome accession | NZ_CP029610 |
| Coordinates | 339123..339764 (+) | Length | 213 a.a. |
| NCBI ID | WP_002116944.1 | Uniprot ID | A0A009RUZ9 |
| Organism | Acinetobacter pittii strain ST220 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 334123..344764
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DLK06_RS01620 (DLK06_01620) | - | 334167..334499 (+) | 333 | WP_002116981.1 | DUF7709 family protein | - |
| DLK06_RS01625 (DLK06_01625) | rrmA | 334502..335326 (+) | 825 | WP_080777164.1 | putative RNA methyltransferase | - |
| DLK06_RS01630 (DLK06_01630) | ponA | 335342..337903 (-) | 2562 | WP_032057246.1 | penicillin-binding protein PBP1a | - |
| DLK06_RS01635 (DLK06_01635) | pilM | 338065..339123 (+) | 1059 | WP_005067078.1 | pilus assembly protein PilM | Machinery gene |
| DLK06_RS01640 (DLK06_01640) | pilN | 339123..339764 (+) | 642 | WP_002116944.1 | PilN domain-containing protein | Machinery gene |
| DLK06_RS01645 (DLK06_01645) | pilO | 339761..340540 (+) | 780 | WP_032057248.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| DLK06_RS01650 (DLK06_01650) | pilP | 340552..341079 (+) | 528 | WP_005067086.1 | pilus assembly protein PilP | Machinery gene |
| DLK06_RS01655 (DLK06_01655) | pilQ | 341142..343307 (+) | 2166 | WP_032063183.1 | type IV pilus secretin PilQ | Machinery gene |
| DLK06_RS01660 (DLK06_01660) | aroK | 343319..343888 (+) | 570 | WP_002116987.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 23921.36 Da Isoelectric Point: 5.4186
>NTDB_id=294170 DLK06_RS01640 WP_002116944.1 339123..339764(+) (pilN) [Acinetobacter pittii strain ST220]
MATINLLPWRDGLREQRKKQFIILCFGVVVLGITTVFAGWFYLNQKLNDQEQANQLIISTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPAAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMSSFLA
TEEKKDKAISSLLPRVEDSYGSFVVTVDVGEMGVTTTDDTANTSVGTDKEAAK
MATINLLPWRDGLREQRKKQFIILCFGVVVLGITTVFAGWFYLNQKLNDQEQANQLIISTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPAAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMSSFLA
TEEKKDKAISSLLPRVEDSYGSFVVTVDVGEMGVTTTDDTANTSVGTDKEAAK
Nucleotide
Download Length: 642 bp
>NTDB_id=294170 DLK06_RS01640 WP_002116944.1 339123..339764(+) (pilN) [Acinetobacter pittii strain ST220]
ATGGCAACAATTAATTTACTCCCTTGGCGTGATGGGCTTAGGGAGCAGCGTAAAAAACAATTTATTATTTTATGTTTTGG
GGTCGTTGTTTTGGGGATAACCACTGTATTTGCAGGGTGGTTTTATTTGAATCAAAAATTAAATGATCAAGAACAAGCAA
ATCAGCTCATCATCAGTACAAACCAGAATCTAGATCAACAACTTAAAACCTTAAATGGCTTGCAAGAACAGCGGGATGCA
ATTATTGAGCGTATGAAGCTCATTCAAGGTTTGCAAAGCCAGCGTCCGGTCGTTGTACGTTTGGTGGATGAATTAGTACG
TGTGACCCCGGCAGCCATGTATTTGACTAAATTCAGTCGAACCGGAGATAAATTTACGATTGAAGGTAAAGCGGAAAGTC
CAAATACGGTTGCAGAATTATTACGTAATCTCGAAGCATCGCCATGGTATCGCAACGCTTTTATGAGTTCTTTCTTGGCG
ACCGAAGAGAAAAAAGATAAGGCTATCAGTTCTTTGCTTCCTAGAGTTGAAGATAGCTATGGCAGTTTTGTTGTTACTGT
TGATGTAGGGGAAATGGGTGTGACTACAACAGATGATACCGCCAATACGTCTGTAGGTACGGATAAGGAGGCGGCAAAAT
GA
ATGGCAACAATTAATTTACTCCCTTGGCGTGATGGGCTTAGGGAGCAGCGTAAAAAACAATTTATTATTTTATGTTTTGG
GGTCGTTGTTTTGGGGATAACCACTGTATTTGCAGGGTGGTTTTATTTGAATCAAAAATTAAATGATCAAGAACAAGCAA
ATCAGCTCATCATCAGTACAAACCAGAATCTAGATCAACAACTTAAAACCTTAAATGGCTTGCAAGAACAGCGGGATGCA
ATTATTGAGCGTATGAAGCTCATTCAAGGTTTGCAAAGCCAGCGTCCGGTCGTTGTACGTTTGGTGGATGAATTAGTACG
TGTGACCCCGGCAGCCATGTATTTGACTAAATTCAGTCGAACCGGAGATAAATTTACGATTGAAGGTAAAGCGGAAAGTC
CAAATACGGTTGCAGAATTATTACGTAATCTCGAAGCATCGCCATGGTATCGCAACGCTTTTATGAGTTCTTTCTTGGCG
ACCGAAGAGAAAAAAGATAAGGCTATCAGTTCTTTGCTTCCTAGAGTTGAAGATAGCTATGGCAGTTTTGTTGTTACTGT
TGATGTAGGGGAAATGGGTGTGACTACAACAGATGATACCGCCAATACGTCTGTAGGTACGGATAAGGAGGCGGCAAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
89.202 |
100 |
0.892 |
| comN | Acinetobacter baylyi ADP1 |
71.569 |
95.775 |
0.685 |