Detailed information NTG0293350

Bioinformatically predicted

Overview

• Name: rarA
• Type: Machinery gene
• Locus tag: EQI87_RS14315
• Genome accession: NZ_CP035166
• Coordinates: 2710050..2711339 (+)
• Length: 429 a.a.
• NCBI ID: WP_046381234.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain SRCM103971
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2705050..2716339

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EQI87_RS14295 (EQI87_14295)	yrrB	2706421..2707041 (-)	621	WP_202926392.1	tetratricopeptide repeat protein	-
EQI87_RS14300 (EQI87_14300)	mnmA	2707127..2708242 (-)	1116	WP_004398509.1	tRNA 2-thiouridine(34) synthase MnmA	-
EQI87_RS14305 (EQI87_14305)	iscSA	2708270..2709412 (-)	1143	WP_046381233.1	cysteine desulfurase family protein	-
EQI87_RS14310 (EQI87_14310)	cymR	2709431..2709847 (-)	417	WP_003225879.1	cysteine metabolism transcriptional regulator CymR	-
EQI87_RS14315 (EQI87_14315)	rarA	2710050..2711339 (+)	1290	WP_046381234.1	replication-associated recombination protein A	Machinery gene
EQI87_RS14320 (EQI87_14320)	tcdA	2711362..2712126 (-)	765	WP_003229763.1	tRNA threonylcarbamoyladenosine dehydratase	-
EQI87_RS14330 (EQI87_14330)	aspS	2712462..2714240 (-)	1779	WP_015251570.1	aspartate--tRNA ligase	-
EQI87_RS14335 (EQI87_14335)	hisS	2714254..2715528 (-)	1275	WP_014480430.1	histidine--tRNA ligase	-
EQI87_RS14340 (EQI87_14340)	yrzK	2715910..2716080 (-)	171	WP_004399157.1	YrzK family protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 47468.47 Da
• Isoelectric Point: 7.6407

>NTDB_id=293350 EQI87_RS14315 WP_046381234.1 2710050..2711339(+) (rarA) [Bacillus subtilis strain SRCM103971]
MKPLAYRMRPTKIEDIIGQQHLVAEDKIIGRMVQAKHLSSMILYGPPGIGKTSIATAIAGSTSIAFRKLNAVINNKKDME
IVAQEAKMSGQVILILDEVHRLDKGKQDFLLPYLENGMIILIGATTANPYHAINPAIRSRTQIFELEPLTPELIKQALER
ALHDEHRGLGTYSVSIDDQAMEHFAHGCGGDVRSALNALELAVLSTKESADGEIHITLETAEECLQKKSFSHDKDGDAHY
DVLSAFQKSIRGSDANAALHYLARLIEAGDLESIARRLLVIAYEDIGLASPQAGPRVLNAIQTAERVGFPEARIPLANAV
IELCLSPKSNSAILAIDEALADIRAGKIGDVPKHLKDAHYKGAQELGRGIDYKYPHNYDNGWVEQQYLPDPLKNKQYYKP
KQTGKFESALKQVYDKLMKRKENKTKKQP

Nucleotide

• Length: 1290 bp

>NTDB_id=293350 EQI87_RS14315 WP_046381234.1 2710050..2711339(+) (rarA) [Bacillus subtilis strain SRCM103971]
ATGAAGCCATTGGCATATCGGATGCGTCCGACAAAAATAGAGGATATTATCGGCCAGCAGCATCTGGTGGCTGAAGATAA
AATTATTGGCAGAATGGTCCAGGCAAAACATTTGTCATCCATGATTTTGTACGGGCCGCCCGGAATTGGAAAAACATCAA
TCGCAACAGCAATCGCCGGTTCAACAAGTATTGCTTTTCGAAAGCTGAATGCTGTCATTAACAATAAAAAAGATATGGAA
ATCGTAGCTCAGGAAGCCAAGATGTCCGGCCAAGTGATTTTGATTCTGGATGAAGTCCACAGGCTGGATAAAGGAAAACA
GGATTTTCTATTACCCTATTTAGAAAACGGAATGATCATTTTGATCGGAGCAACGACGGCTAACCCGTATCATGCCATTA
ATCCGGCGATCAGAAGCCGGACCCAGATTTTTGAGCTTGAACCGTTAACACCTGAACTGATTAAACAGGCACTGGAACGT
GCGCTCCATGATGAGCATCGGGGCCTTGGCACCTATTCTGTATCCATTGATGATCAGGCGATGGAGCATTTTGCCCACGG
ATGCGGAGGAGATGTCCGCTCCGCTTTAAATGCGCTTGAGCTTGCCGTGTTGTCAACGAAGGAGTCAGCAGACGGTGAAA
TTCACATTACATTAGAAACCGCGGAAGAATGCTTGCAGAAAAAAAGCTTTTCTCACGATAAAGATGGTGACGCGCATTAT
GATGTACTGTCCGCTTTTCAAAAATCAATCCGCGGCTCTGATGCCAACGCTGCTCTTCACTATTTGGCTAGATTAATTGA
AGCCGGTGATCTGGAGAGCATCGCAAGACGATTGCTTGTTATCGCCTATGAGGATATCGGTTTAGCAAGCCCGCAAGCCG
GCCCTAGAGTGCTGAACGCTATTCAGACCGCTGAGCGAGTCGGGTTTCCTGAAGCGCGAATCCCGCTGGCCAACGCAGTT
ATTGAGCTTTGCCTCTCACCGAAATCAAACTCTGCCATTCTGGCAATCGATGAGGCCCTGGCAGATATCAGAGCCGGAAA
AATTGGGGATGTCCCGAAGCATTTAAAAGACGCGCATTATAAAGGAGCTCAGGAATTAGGAAGAGGAATCGACTATAAAT
ACCCGCACAATTACGACAACGGTTGGGTCGAACAACAATACCTCCCTGATCCTCTGAAAAATAAGCAATACTATAAGCCG
AAACAGACTGGAAAGTTCGAATCTGCCTTAAAGCAGGTGTACGATAAATTAATGAAAAGAAAAGAAAATAAAACAAAAAA
ACAGCCTTGA

Domains

Predicted by InterProScan.

• MgsA AAA+ ATPase C terminal (MgsA_C) (252-417)

• AAA C-terminal domain (AAA_assoc_2) (172-251)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (8-125)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rarA	Bacillus subtilis subsp. subtilis str. 168	100	98.135	0.981