Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   DJ572_RS15825 Genome accession   NZ_CP029461
Coordinates   3029188..3031497 (-) Length   769 a.a.
NCBI ID   WP_119899725.1    Uniprot ID   -
Organism   Bacillus subtilis strain QB61     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3024188..3036497
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DJ572_RS15785 (DJ572_15695) mrpB 3024653..3025084 (+) 432 WP_038429537.1 Na(+)/H(+) antiporter subunit B -
  DJ572_RS15790 (DJ572_15700) mrpC 3025084..3025425 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  DJ572_RS15795 (DJ572_15705) mrpD 3025418..3026899 (+) 1482 WP_038429539.1 Na+/H+ antiporter subunit D -
  DJ572_RS15800 (DJ572_15710) mrpE 3026905..3027381 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  DJ572_RS15805 (DJ572_15715) mrpF 3027381..3027665 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  DJ572_RS15810 (DJ572_15720) mnhG 3027649..3028023 (+) 375 WP_014477830.1 monovalent cation/H(+) antiporter subunit G -
  DJ572_RS15815 (DJ572_15725) yuxO 3028064..3028444 (-) 381 WP_017695528.1 hotdog fold thioesterase -
  DJ572_RS15820 (DJ572_15730) comA 3028463..3029107 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  DJ572_RS15825 (DJ572_15735) comP 3029188..3031497 (-) 2310 WP_119899725.1 two-component system sensor histidine kinase ComP Regulator
  DJ572_RS15830 (DJ572_15740) comX 3031516..3031683 (-) 168 WP_101501417.1 competence pheromone ComX Regulator
  DJ572_RS15835 (DJ572_15745) comQ 3031701..3032570 (-) 870 WP_119899727.1 ComX modifying isoprenyl transferase ComQ Regulator
  DJ572_RS15840 (DJ572_15750) degQ 3032755..3032895 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  DJ572_RS15845 - 3033117..3033242 (+) 126 WP_003228793.1 hypothetical protein -
  DJ572_RS15850 (DJ572_15755) - 3033358..3033726 (+) 369 WP_119899729.1 hypothetical protein -
  DJ572_RS15855 (DJ572_15760) pdeH 3033702..3034931 (-) 1230 WP_046381301.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 88973.48 Da        Isoelectric Point: 7.8349

>NTDB_id=292594 DJ572_RS15825 WP_119899725.1 3029188..3031497(-) (comP) [Bacillus subtilis strain QB61]
MKNLMKKFTIAVIVLSILYISYTTYISMNGIIIGTKVHKSDKGQFVIEEISESSYGQFVGLKKGDIILKINEEKPADKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNGPYSFFLFVLPLVFYFLSIICIFYILKVNKIRRSFAGYILILLLLDISI
AYISAGGPFRGHIINRYINLFTFISSPILYLQFIQRYLGEIGKTFLNRISFLYIIPIFNAVIEFFQTYLQIDIDFLATVN
LVSFAILTLFSFSAIYFHLNKYKYAEHSFILKLLILTNTLSFAPFLVFYVLPIIITGNYIFPALASASLLALIPLGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVLDIQMNPVRQTVFFFVVMFAVFYFKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVISLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEIGPDWHFYQEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=292594 DJ572_RS15825 WP_119899725.1 3029188..3031497(-) (comP) [Bacillus subtilis strain QB61]
TTGAAGAACTTGATGAAAAAATTCACAATAGCTGTTATTGTTTTGAGTATCCTCTATATAAGCTATACAACTTATATCAG
TATGAATGGGATTATTATTGGGACTAAGGTTCATAAAAGTGATAAAGGTCAATTTGTGATAGAAGAAATATCAGAATCTT
CATATGGACAATTTGTTGGTCTGAAAAAAGGAGATATCATATTAAAAATTAATGAAGAGAAACCTGCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTTTGGATATTTTAAGAAGTGGAAAAAAGATTCACCTTAAAGATTTTGATTT
AGTTACGCTAAACGGGCCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTATTTTTTAAGCATAATATGCATTT
TTTATATACTTAAAGTAAATAAAATAAGAAGATCATTTGCTGGTTATATTCTTATTCTTTTGTTATTAGACATTTCTATT
GCATATATAAGTGCAGGCGGACCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATACAAAGATATCTTGGAGAAATAGGAAAAACTTTTTTGAATAGAATCTCCTTTCTTTATA
TCATACCAATATTTAATGCTGTAATTGAGTTTTTTCAAACCTATTTACAAATAGATATTGATTTTTTAGCAACTGTTAAC
TTAGTTTCTTTTGCAATTTTGACTCTATTTTCATTTTCAGCGATATACTTTCATCTTAATAAGTATAAATATGCTGAGCA
TTCGTTTATTCTAAAATTACTAATTTTAACAAACACTCTTTCTTTTGCGCCTTTTTTGGTATTCTATGTTCTTCCAATAA
TAATTACAGGTAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTACTAGCACTTATTCCGTTAGGGTTAGTATATCAA
TTTGTAGCCAATAAAATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTGGCCATGATACCAAC
TCTTCTAATAGTTGGTGCATTAGTTCTGTTTGATGTATTGGACATCCAGATGAACCCTGTGCGTCAAACTGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATAGATTTTAAATTTCGGTTAAAACGTTTCTCTGAAAAATTC
AACTATCAGGACAGTATCTTTAAATATACTCAGCTAATGAGGGGGGTAATTTCTCTCCAACAAGTCTTTAAAGAACTGAA
AAATACTATTTTGGATGTTTTACTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAATTGGACCGGACTGGCATTTTTATCAAGAGGAATTTGAAAACGTAACTTCAGAAATCGGGAAAATTATT
GAAGTCAATCAGGGTTTTCTTATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCTCGGCTAACACGGGATGAGATATCATGGTTGAAAACACTGTCTTTCTATACAAGTGTGTCCATGGAAAATGTCA
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGATTTGATTTCCTTAAA
ACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAGAAGGATGACAATCCGTGTCGTGAAGAGGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGGCTGGTCAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGG
GAGATTTACGGCTTCACTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGC
GTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

95.969

100

0.96


Multiple sequence alignment