Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   DG474_RS09575 Genome accession   NZ_CP029257
Coordinates   2001047..2001805 (+) Length   252 a.a.
NCBI ID   WP_000410359.1    Uniprot ID   A0A1X1GXY0
Organism   Streptococcus oralis strain CCUG 53468     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1996047..2006805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DG474_RS09545 (DG474_09695) comE 1996632..1997384 (-) 753 WP_000866079.1 competence system response regulator transcription factor ComE Regulator
  DG474_RS09550 (DG474_09700) comD 1997381..1998700 (-) 1320 WP_255778222.1 competence system sensor histidine kinase ComD Regulator
  DG474_RS09555 (DG474_09705) comC/comC1 1998721..1998846 (-) 126 WP_008282505.1 competence-stimulating peptide ComC Regulator
  DG474_RS09565 (DG474_09715) rlmH 1999128..1999607 (-) 480 WP_255778224.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  DG474_RS09570 (DG474_09720) htrA 1999793..2000989 (+) 1197 WP_000681803.1 S1C family serine protease Regulator
  DG474_RS09575 (DG474_09725) spo0J 2001047..2001805 (+) 759 WP_000410359.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29037.54 Da        Isoelectric Point: 8.2829

>NTDB_id=291454 DG474_RS09575 WP_000410359.1 2001047..2001805(+) (spo0J) [Streptococcus oralis strain CCUG 53468]
MEKFEMISISEIQKNPYQPRKEFDVEKLKELAQSIKENGLIQPIIVRQSPVIGYEILAGERRYRASLLAGLTSIPAVVKH
LSDQEMMIQSIIENLQRENLNPVEEARAYESLVEKGFTHTDIADKMGKSRPYITNFIRLLSLPEYILAEVENGKISQAHA
RSLVGLDKEQQDYFFQLIKNEDISVRKLEALLTEKKHKKQKKSDSFIKDEEDKLKKILGLSVEIKLSKKDTGKIIISFSS
QEEYDRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=291454 DG474_RS09575 WP_000410359.1 2001047..2001805(+) (spo0J) [Streptococcus oralis strain CCUG 53468]
ATGGAAAAATTTGAAATGATTTCTATCTCTGAAATACAAAAGAATCCTTACCAACCTCGGAAAGAATTTGATGTAGAAAA
ATTAAAAGAATTAGCTCAGTCAATCAAAGAAAATGGGCTCATCCAACCAATCATCGTTCGTCAATCTCCTGTAATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGATATCGGGCTTCTCTCTTGGCTGGTCTAACCTCTATTCCAGCCGTTGTAAAGCAC
CTCTCAGATCAGGAAATGATGATTCAGTCAATCATTGAGAATTTGCAGAGAGAAAATTTAAATCCTGTTGAAGAAGCACG
CGCCTACGAATCTTTAGTAGAAAAAGGATTTACTCACACTGATATAGCGGATAAAATGGGGAAATCTCGTCCTTATATCA
CTAATTTTATTCGTTTGCTTTCCCTACCAGAATATATCTTAGCTGAAGTAGAAAATGGAAAAATTTCTCAAGCGCATGCA
CGTTCACTAGTTGGTTTAGACAAAGAGCAGCAAGACTATTTCTTCCAACTAATCAAAAATGAAGATATTTCTGTGAGAAA
GTTAGAAGCACTTCTTACAGAGAAAAAACACAAGAAGCAGAAAAAAAGTGATTCTTTCATCAAAGATGAAGAAGATAAAT
TAAAAAAAATACTCGGTTTAAGTGTAGAAATTAAACTTTCAAAAAAAGATACTGGAAAGATTATTATCTCCTTTTCAAGT
CAAGAAGAATACGATAGAATTATTAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

ParB/Sulfiredoxin domain (ParB_N)

(6-94)

HTH domain found in ParB protein (HTH_ParB)

(145-192)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A1X1GXY0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.988

100

0.512

Multiple sequence alignment