Detailed information NTG0289235

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: DDE02_RS01575
• Genome accession: NZ_CP029005
• Coordinates: 332644..333702 (+)
• Length: 352 a.a.
• NCBI ID: WP_031945632.1
• Uniprot ID: A0A8I1HC74
• Organism: Acinetobacter pittii strain AbW39
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 327644..338702

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DDE02_RS01560 (DDE02_01570)	-	328708..329040 (+)	333	WP_002116981.1	hypothetical protein	-
DDE02_RS01565 (DDE02_01575)	rrmA	329043..329867 (+)	825	WP_002117059.1	putative RNA methyltransferase	-
DDE02_RS01570 (DDE02_01580)	ponA	329922..332483 (-)	2562	WP_002116655.1	penicillin-binding protein PBP1a	-
DDE02_RS01575 (DDE02_01585)	pilM	332644..333702 (+)	1059	WP_031945632.1	pilus assembly protein PilM	Machinery gene
DDE02_RS01580 (DDE02_01590)	pilN	333702..334343 (+)	642	WP_002116944.1	PilN domain-containing protein	Machinery gene
DDE02_RS01585 (DDE02_01595)	pilO	334340..335092 (+)	753	WP_002116684.1	type 4a pilus biogenesis protein PilO	Machinery gene
DDE02_RS01590 (DDE02_01600)	pilP	335103..335630 (+)	528	WP_002116864.1	pilus assembly protein PilP	Machinery gene
DDE02_RS01595 (DDE02_01605)	pilQ	335693..337858 (+)	2166	WP_002116833.1	type IV pilus secretin PilQ	Machinery gene
DDE02_RS01600 (DDE02_01610)	aroK	337870..338439 (+)	570	WP_002116987.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39054.62 Da
• Isoelectric Point: 4.4657

>NTDB_id=289235 DDE02_RS01575 WP_031945632.1 332644..333702(+) (pilM) [Acinetobacter pittii strain AbW39]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALTPLPENSVVEKNILNPEAVAEALERAMNLANPHTTNAAI
AVPTSTVIHKTIEMDADMNDDEREVQIRLDAEQYIPFPLDEVSLDFEVLPDRLPNPNRVNVLLVATRTENVETRVEVLEL
VDLTPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLSLEIQSRYGLSLEE
AGRAKKERSLPDDYDIEILEPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=289235 DDE02_RS01575 WP_031945632.1 332644..333702(+) (pilM) [Acinetobacter pittii strain AbW39]
GTGCTCAGGTTATATCGTAAACCGAATAAGGGGTTAATGGGCGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTTAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTAACGCCTTTACCTGAGAACAGTGTAGTTGAAAAAAATA
TTTTGAATCCAGAAGCAGTTGCAGAAGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCACACCACTAACGCTGCAATT
GCTGTTCCAACATCGACGGTTATTCATAAAACCATCGAAATGGATGCAGATATGAACGATGATGAACGTGAAGTTCAGAT
TCGATTAGATGCGGAGCAATATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTACCAGATCGACTGC
CGAATCCAAATCGTGTGAATGTACTTTTAGTCGCAACACGAACAGAAAATGTTGAAACACGCGTAGAAGTACTGGAACTA
GTTGATTTAACGCCTAAGCTTGCTGATGTTGAAAGTTATGCTGTTGAGCGTGCTTTTAGTGTGTTTGCTGATAGCTTACC
CATGGGTGCAAATACCATTGGTATTTTAGATATTGGCCATACCATGACGACATTATCGGTTATGCAAAATGGCAAAATCA
TTTATACCCGTGAACAAGTCTTTGGCGGTAAACAGCTTAGTTTGGAAATTCAAAGCCGTTACGGTTTGTCATTAGAAGAA
GCGGGACGCGCTAAAAAAGAACGTTCTTTGCCAGATGATTATGACATCGAAATCTTAGAACCATTTTTAGATGCTGTAGT
TCAGCAAGCTGCTAGATCTCTACAATTTTTCTTCTCTTCATCCCAATTCAATGAAATTGACCATATTTTGCTAGCGGGTG
GCAATGCCAACATTCCAGGGCTTGCTAAATTATTGCAACAAAAACTCGGTTACCGAGTCACTATTGCCAATCCATTTTTA
CAAATGGGTTTCTCTCCTCAAGTCGACGTTCAAAAAATTGAAAATGATGCTTCTTCATTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	96.023	100	0.96
comM	Acinetobacter nosocomialis M2	96.023	100	0.96
comM	Acinetobacter baylyi ADP1	80.966	100	0.81
pilM	Legionella pneumophila strain ERS1305867	41.808	100	0.42