Detailed information
Bioinformatically predicted
Overview
| Name | pilN | Type | Machinery gene |
| Locus tag | DDE02_RS01580 | Genome accession | NZ_CP029005 |
| Coordinates | 333702..334343 (+) | Length | 213 a.a. |
| NCBI ID | WP_002116944.1 | Uniprot ID | A0A009RUZ9 |
| Organism | Acinetobacter pittii strain AbW39 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 328702..339343
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DDE02_RS01560 (DDE02_01570) | - | 328708..329040 (+) | 333 | WP_002116981.1 | hypothetical protein | - |
| DDE02_RS01565 (DDE02_01575) | rrmA | 329043..329867 (+) | 825 | WP_002117059.1 | putative RNA methyltransferase | - |
| DDE02_RS01570 (DDE02_01580) | ponA | 329922..332483 (-) | 2562 | WP_002116655.1 | penicillin-binding protein PBP1a | - |
| DDE02_RS01575 (DDE02_01585) | pilM | 332644..333702 (+) | 1059 | WP_031945632.1 | pilus assembly protein PilM | Machinery gene |
| DDE02_RS01580 (DDE02_01590) | pilN | 333702..334343 (+) | 642 | WP_002116944.1 | PilN domain-containing protein | Machinery gene |
| DDE02_RS01585 (DDE02_01595) | pilO | 334340..335092 (+) | 753 | WP_002116684.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| DDE02_RS01590 (DDE02_01600) | pilP | 335103..335630 (+) | 528 | WP_002116864.1 | pilus assembly protein PilP | Machinery gene |
| DDE02_RS01595 (DDE02_01605) | pilQ | 335693..337858 (+) | 2166 | WP_002116833.1 | type IV pilus secretin PilQ | Machinery gene |
| DDE02_RS01600 (DDE02_01610) | aroK | 337870..338439 (+) | 570 | WP_002116987.1 | shikimate kinase AroK | - |
Sequence
Protein
Download Length: 213 a.a. Molecular weight: 23921.36 Da Isoelectric Point: 5.4186
>NTDB_id=289236 DDE02_RS01580 WP_002116944.1 333702..334343(+) (pilN) [Acinetobacter pittii strain AbW39]
MATINLLPWRDGLREQRKKQFIILCFGVVVLGITTVFAGWFYLNQKLNDQEQANQLIISTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPAAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMSSFLA
TEEKKDKAISSLLPRVEDSYGSFVVTVDVGEMGVTTTDDTANTSVGTDKEAAK
MATINLLPWRDGLREQRKKQFIILCFGVVVLGITTVFAGWFYLNQKLNDQEQANQLIISTNQNLDQQLKTLNGLQEQRDA
IIERMKLIQGLQSQRPVVVRLVDELVRVTPAAMYLTKFSRTGDKFTIEGKAESPNTVAELLRNLEASPWYRNAFMSSFLA
TEEKKDKAISSLLPRVEDSYGSFVVTVDVGEMGVTTTDDTANTSVGTDKEAAK
Nucleotide
Download Length: 642 bp
>NTDB_id=289236 DDE02_RS01580 WP_002116944.1 333702..334343(+) (pilN) [Acinetobacter pittii strain AbW39]
ATGGCAACAATTAATTTACTCCCTTGGCGTGATGGGCTTAGGGAGCAGCGTAAAAAACAATTTATTATTTTATGTTTTGG
GGTCGTTGTTTTGGGGATAACCACTGTATTTGCAGGGTGGTTTTATTTGAATCAAAAATTAAATGATCAAGAACAAGCAA
ATCAGCTCATCATCAGTACAAACCAGAATCTAGATCAACAACTTAAAACCTTAAATGGCTTGCAAGAACAGCGGGATGCA
ATTATTGAGCGTATGAAGCTCATTCAAGGTTTGCAAAGCCAGCGTCCGGTCGTTGTACGTTTGGTGGATGAATTAGTACG
TGTGACCCCGGCAGCCATGTATTTGACTAAATTCAGTCGAACCGGAGATAAATTTACGATTGAAGGTAAAGCGGAAAGTC
CAAATACGGTTGCAGAATTATTACGTAATCTCGAAGCATCGCCATGGTATCGCAACGCTTTTATGAGTTCTTTCTTGGCG
ACCGAAGAGAAAAAAGATAAGGCTATCAGTTCTTTGCTTCCTAGAGTTGAAGATAGCTATGGCAGTTTTGTTGTTACTGT
TGATGTAGGGGAAATGGGTGTGACTACAACAGATGATACCGCCAATACGTCTGTAGGTACGGATAAGGAGGCGGCAAAAT
GA
ATGGCAACAATTAATTTACTCCCTTGGCGTGATGGGCTTAGGGAGCAGCGTAAAAAACAATTTATTATTTTATGTTTTGG
GGTCGTTGTTTTGGGGATAACCACTGTATTTGCAGGGTGGTTTTATTTGAATCAAAAATTAAATGATCAAGAACAAGCAA
ATCAGCTCATCATCAGTACAAACCAGAATCTAGATCAACAACTTAAAACCTTAAATGGCTTGCAAGAACAGCGGGATGCA
ATTATTGAGCGTATGAAGCTCATTCAAGGTTTGCAAAGCCAGCGTCCGGTCGTTGTACGTTTGGTGGATGAATTAGTACG
TGTGACCCCGGCAGCCATGTATTTGACTAAATTCAGTCGAACCGGAGATAAATTTACGATTGAAGGTAAAGCGGAAAGTC
CAAATACGGTTGCAGAATTATTACGTAATCTCGAAGCATCGCCATGGTATCGCAACGCTTTTATGAGTTCTTTCTTGGCG
ACCGAAGAGAAAAAAGATAAGGCTATCAGTTCTTTGCTTCCTAGAGTTGAAGATAGCTATGGCAGTTTTGTTGTTACTGT
TGATGTAGGGGAAATGGGTGTGACTACAACAGATGATACCGCCAATACGTCTGTAGGTACGGATAAGGAGGCGGCAAAAT
GA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilN | Acinetobacter baumannii D1279779 |
89.202 |
100 |
0.892 |
| comN | Acinetobacter baylyi ADP1 |
71.569 |
95.775 |
0.685 |