Detailed information    

insolico Bioinformatically predicted

Overview


Name   ceuB   Type   Machinery gene
Locus tag   EGM95_RS05430 Genome accession   NZ_CP033869
Coordinates   1150377..1151318 (+) Length   313 a.a.
NCBI ID   WP_001159458.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain MRSN15313     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1145377..1156318
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EGM95_RS05420 (EGM95_05420) basA 1145797..1147644 (+) 1848 WP_024437077.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  EGM95_RS05425 (EGM95_05425) basB 1147715..1149745 (-) 2031 WP_079746264.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  EGM95_RS05430 (EGM95_05430) ceuB 1150377..1151318 (+) 942 WP_001159458.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  EGM95_RS05435 (EGM95_05435) bauC 1151318..1152265 (+) 948 WP_024437076.1 ferric acinetobactin ABC transporter permease subunit BauC -
  EGM95_RS05440 (EGM95_05440) bauE 1152262..1153032 (+) 771 WP_024437075.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  EGM95_RS05445 (EGM95_05445) bauB 1153039..1154007 (+) 969 WP_001104123.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence


Protein


Download         Length: 313 a.a.        Molecular weight: 33965.00 Da        Isoelectric Point: 8.4665

>NTDB_id=285574 EGM95_RS05430 WP_001159458.1 1150377..1151318(+) (ceuB) [Acinetobacter baumannii strain MRSN15313]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=285574 EGM95_RS05430 WP_001159458.1 1150377..1151318(+) (ceuB) [Acinetobacter baumannii strain MRSN15313]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGTTCGTTATTGCTGGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTTCTTA
CCGGTATCGGATTGGCGGTATGTGGCGTCATCTTGCAGCACATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCGTTAACTTTAGTTCCAGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGGCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACATCGCTTTACCGTGATTGGTATGGGTGAAGAGATGGCTTCTAGCTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTAATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTGGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTGGGTGGGGCGTCTCTATTACTAGTTTGCGACATTCTTGGTCGCTCCATTATTTATCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains


Predicted by InterProScan.

(9-310)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.595

94.569

0.422


Multiple sequence alignment