Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | DBQ26_RS01745 | Genome accession | NZ_CP028574 |
| Coordinates | 110696..111178 (+) | Length | 160 a.a. |
| NCBI ID | WP_002116770.1 | Uniprot ID | A0A009RUX0 |
| Organism | Acinetobacter pittii strain WCHAP005046 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 105696..116178
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBQ26_RS01735 (DBQ26_01740) | pilX | 106010..106819 (+) | 810 | WP_017481716.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| DBQ26_RS01740 (DBQ26_01745) | pilY1 | 106831..110685 (+) | 3855 | WP_017481715.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| DBQ26_RS01745 (DBQ26_01750) | pilY2 | 110696..111178 (+) | 483 | WP_002116770.1 | type IV pilin protein | Machinery gene |
| DBQ26_RS01750 (DBQ26_01755) | pilE | 111175..111600 (+) | 426 | WP_002117055.1 | type IV pilin protein | Machinery gene |
| DBQ26_RS01755 (DBQ26_01760) | rpsP | 111748..111999 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| DBQ26_RS01760 (DBQ26_01765) | rimM | 112019..112567 (+) | 549 | WP_002116736.1 | ribosome maturation factor RimM | - |
| DBQ26_RS01765 (DBQ26_01770) | trmD | 112610..113365 (+) | 756 | WP_002116964.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| DBQ26_RS01770 (DBQ26_01775) | rplS | 113585..113953 (+) | 369 | WP_002116654.1 | 50S ribosomal protein L19 | - |
| DBQ26_RS01775 (DBQ26_01780) | lip | 114006..114947 (-) | 942 | WP_080612940.1 | lipase family alpha/beta hydrolase | - |
| DBQ26_RS01780 (DBQ26_01785) | - | 115063..116094 (-) | 1032 | WP_017481713.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17520.76 Da Isoelectric Point: 8.4721
>NTDB_id=285575 DBQ26_RS01745 WP_002116770.1 110696..111178(+) (pilY2) [Acinetobacter pittii strain WCHAP005046]
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
MNKYYIQRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKGEILKLAEQLERHKSKNFTYRGFTTTSVTLP
RGGYTIEISDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGAVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=285575 DBQ26_RS01745 WP_002116770.1 110696..111178(+) (pilY2) [Acinetobacter pittii strain WCHAP005046]
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAATACTATATCCAACGGTTTAATCAGGGTGTTACCTTGATTGAGCTCATGGTTGTCATCGTGATTGTCGCTAT
TTTTGCTTCGATTGCTATCCCTTCATATCAAAGTTATAGCCGCAGAGCGACTGCCTCTGCTGCTAAAGGTGAAATTCTAA
AATTGGCAGAACAGTTGGAACGGCATAAATCCAAGAACTTTACCTATAGAGGATTTACTACGACATCTGTAACTTTGCCA
CGGGGTGGTTATACGATTGAAATTAGTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAGAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAATTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGCCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAGCAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
93.75 |
100 |
0.938 |
| comE | Acinetobacter baylyi ADP1 |
40.678 |
100 |
0.45 |