Detailed information NTG0284582

Bioinformatically predicted

Overview

• Name: comA
• Type: Regulator
• Locus tag: C9I44_RS08505
• Genome accession: NZ_CP028386
• Coordinates: 1663752..1665899 (+)
• Length: 715 a.a.
• NCBI ID: WP_233239239.1
• Uniprot ID: -
• Organism: Lactococcus garvieae strain IBB3403
• Function: processing and transport of ComC (predicted from homology) Competence regulation

Genomic Context

Location: 1658752..1670899

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C9I44_RS08475 (C9I44_08440)	-	1658878..1659195 (+)	318	WP_003133044.1	helix-turn-helix domain-containing protein	-
C9I44_RS08480 (C9I44_08445)	-	1659377..1660402 (-)	1026	WP_035001824.1	hypothetical protein	-
C9I44_RS11505	-	1660920..1661054 (+)	135	WP_368819573.1	putative holin-like toxin	-
C9I44_RS08485 (C9I44_08450)	-	1661246..1662103 (-)	858	WP_213439498.1	DUF5677 domain-containing protein	-
C9I44_RS08490 (C9I44_08455)	-	1662136..1662753 (-)	618	WP_003133045.1	recombinase family protein	-
C9I44_RS08495 (C9I44_08460)	garQ	1663075..1663287 (+)	213	WP_003133047.1	class II bacteriocin garvicin Q	-
C9I44_RS08500 (C9I44_08465)	-	1663311..1663625 (+)	315	WP_003133049.1	bacteriocin immunity protein	-
C9I44_RS08505 (C9I44_08470)	comA	1663752..1665899 (+)	2148	WP_233239239.1	peptide cleavage/export ABC transporter	Regulator
C9I44_RS08510 (C9I44_08475)	-	1665909..1667336 (+)	1428	WP_003133052.1	bacteriocin secretion accessory protein	-
C9I44_RS08520 (C9I44_08480)	-	1667792..1668241 (-)	450	WP_233239240.1	hypothetical protein	-
C9I44_RS08525 (C9I44_08485)	-	1668316..1669251 (-)	936	WP_003133055.1	tyrosine-type recombinase/integrase	-
C9I44_RS08530 (C9I44_08490)	eno	1669338..1670639 (-)	1302	WP_003133057.1	surface-displayed alpha-enolase	-

Sequence

Protein

• Length: 715 a.a.
• Molecular weight: 80785.24 Da
• Isoelectric Point: 8.5680

>NTDB_id=284582 C9I44_RS08505 WP_233239239.1 1663752..1665899(+) (comA) [Lactococcus garvieae strain IBB3403]
MRFKKKYYTSQVDERDCGCAALSMVLKTYGTEQSLASIRLLAGTTIEGTSALGIKKAAEHLKFSVQAFRADPTLFDTKKL
PYPFIVHVVKEKKYPHYYVVKSSNKKHIIIADPDSTVKIRKMTWDQFYSEWTGVTLFIAPQPSYKPVKEKSESLFSFIPI
LAKQKLLVFQIIIASLLVTLINIIGSYYLQNIIDEYVPNALMKTLSIVSLGLMATYLIQQFLNFAQTFLLTILGQRLAID
VILSYIRHIFQLPMSFFSTRRTGEITSRFSDANSIIDALASAILSLFLDVTIVILTGLVLGLQNMSLFFLVLFSIPLYVL
IIFIFIPLFEKQNNEVMQANSILNSSIIEDINGIETIKSLGSEEVRYQKIDREFSDYMKKSFSRQKSEAFQTALKSGLQL
VLNVLILWYGANLVMSQKITLGQLITFNALLSYFMNPLSNIINLQTKLQSAKVANHRLNEVYLVDSEFDTNTDEVILSNF
EMQLIGISYHYGFGRYILSNISLNIKENEKLTIVGMSGSGKSTLVKLLVNFFEPTQGTIILGGIDIKQMDKHQLRSIVSY
LPQQPYIFTGTVLENLILGASEDLSQEEIFQAVEAAEIRSDIEQLQLGYQTELSSDATTLSGGQKQRIALARALLSPAKI
LIFDEATSNLDMITEKKILKNLFKLDKTIIFIAHRLSIAEKSDRIIVIDQGKIMEEGSHLELLSKNGFYTQLYNQ

Nucleotide

• Length: 2148 bp

>NTDB_id=284582 C9I44_RS08505 WP_233239239.1 1663752..1665899(+) (comA) [Lactococcus garvieae strain IBB3403]
ATGCGTTTTAAAAAGAAATATTATACGTCACAAGTGGACGAAAGAGATTGTGGGTGTGCTGCTCTTTCCATGGTTTTAAA
AACTTATGGTACAGAACAATCCTTAGCTTCAATACGTTTACTTGCTGGTACAACGATAGAAGGCACTTCTGCTTTAGGTA
TAAAAAAAGCCGCGGAACATTTAAAGTTCAGCGTTCAAGCCTTTCGTGCAGATCCAACTCTATTTGATACAAAGAAACTT
CCTTATCCATTTATTGTTCATGTGGTTAAAGAAAAGAAATACCCTCACTATTATGTGGTTAAATCCTCCAATAAAAAACA
TATCATTATTGCAGATCCAGATTCCACGGTTAAAATTCGGAAAATGACTTGGGACCAGTTTTATTCTGAATGGACAGGTG
TAACTTTATTTATTGCTCCTCAACCTTCTTATAAACCAGTGAAAGAAAAATCCGAGTCTTTGTTTTCTTTTATACCCATA
CTCGCAAAGCAAAAGTTGCTTGTTTTTCAGATTATTATTGCTTCTCTTTTGGTCACTTTAATTAATATTATCGGCTCTTA
TTATCTTCAGAATATTATTGACGAATATGTGCCTAATGCTTTAATGAAGACTTTAAGCATTGTTTCTCTCGGATTAATGG
CAACCTATCTCATCCAGCAATTCCTTAATTTTGCTCAAACTTTCTTACTTACAATACTTGGACAACGTTTAGCCATTGAT
GTTATCCTTTCCTATATCCGTCATATTTTTCAACTTCCTATGTCCTTTTTTTCTACACGAAGAACGGGAGAAATTACCAG
TCGTTTCTCTGACGCTAATTCAATTATTGATGCCCTTGCTTCTGCCATCTTATCTCTTTTCTTAGATGTCACGATTGTCA
TTCTGACAGGGCTTGTTTTAGGACTTCAAAACATGAGCTTATTCTTCCTTGTCTTGTTTTCCATTCCACTTTATGTTCTT
ATCATTTTTATTTTTATTCCTTTATTTGAAAAACAAAATAATGAAGTCATGCAAGCAAATTCTATTTTAAATTCATCAAT
TATTGAAGATATCAATGGAATTGAAACTATTAAATCTCTTGGAAGTGAGGAGGTTCGCTATCAAAAAATAGACCGTGAAT
TTTCAGACTATATGAAAAAATCATTCTCGCGTCAAAAATCAGAAGCTTTTCAAACTGCCTTGAAATCAGGATTACAACTT
GTTTTAAATGTACTTATCTTGTGGTATGGAGCTAACCTCGTGATGAGCCAAAAAATCACCTTGGGTCAATTGATTACTTT
CAATGCCTTACTTTCATACTTTATGAATCCTCTCTCTAATATCATCAACTTACAAACTAAACTTCAATCCGCTAAAGTAG
CTAACCATCGTTTAAATGAAGTTTACTTGGTAGACAGTGAATTTGATACAAATACAGATGAAGTTATTCTTTCAAATTTT
GAGATGCAGTTGATAGGTATATCTTACCACTATGGTTTTGGTAGATACATTCTCTCTAATATTTCACTTAATATAAAAGA
AAATGAAAAATTAACAATTGTCGGAATGAGTGGCTCAGGTAAAAGTACCCTAGTCAAATTGTTGGTTAATTTTTTCGAAC
CTACACAAGGGACTATCATTCTTGGGGGGATAGATATAAAACAAATGGATAAGCACCAATTGAGAAGTATTGTCAGCTAT
CTTCCCCAACAACCGTATATCTTTACAGGAACAGTACTAGAGAACTTAATCTTAGGAGCAAGTGAGGATCTTTCTCAGGA
AGAAATTTTCCAAGCTGTTGAAGCTGCAGAAATTCGTTCCGACATTGAACAGCTTCAATTGGGCTATCAAACAGAACTAT
CTAGTGATGCTACAACTCTCTCTGGAGGGCAAAAACAAAGAATCGCATTGGCTCGTGCCTTACTTTCTCCCGCGAAGATT
CTTATTTTTGATGAAGCAACAAGTAATCTGGATATGATTACAGAGAAAAAAATTCTGAAAAATCTATTTAAGTTAGATAA
AACCATTATTTTTATTGCCCATCGTCTGTCTATCGCGGAAAAGAGCGACAGGATTATTGTTATTGATCAGGGAAAAATTA
TGGAAGAAGGTAGTCATTTAGAACTGCTTTCTAAAAATGGTTTTTATACACAACTTTATAATCAATAG

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (498-648)

• ABC transporter transmembrane region (ABC_membrane) (170-438)

• Peptidase C39 family (Peptidase_C39) (6-142)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Streptococcus gordonii str. Challis substr. CH1	60.754	100	0.608
comA	Streptococcus mitis SK321	59.358	100	0.594
comA	Streptococcus mitis NCTC 12261	59.218	100	0.593
comA/nlmT	Streptococcus mutans UA159	59.135	100	0.593
comA	Streptococcus pneumoniae D39	59.078	100	0.592
comA	Streptococcus pneumoniae R6	59.078	100	0.592
comA	Streptococcus pneumoniae Rx1	59.078	100	0.592
comA	Streptococcus pneumoniae TIGR4	58.799	100	0.589