Detailed information
Bioinformatically predicted
Overview
| Name | rcrQ | Type | Regulator |
| Locus tag | ROSERS_RS12160 | Genome accession | NC_009523 |
| Coordinates | 2910933..2911172 (+) | Length | 79 a.a. |
| NCBI ID | WP_041333578.1 | Uniprot ID | - |
| Organism | Roseiflexus sp. RS-1 | ||
| Function | regulate competence (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2905933..2916172
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ROSERS_RS12140 (RoseRS_2349) | rodA | 2906586..2907689 (+) | 1104 | WP_011957073.1 | rod shape-determining protein RodA | - |
| ROSERS_RS12145 (RoseRS_2350) | - | 2907838..2908422 (+) | 585 | WP_011957074.1 | PspC domain-containing protein | - |
| ROSERS_RS12150 (RoseRS_2351) | - | 2908430..2909629 (-) | 1200 | WP_011957075.1 | HAMP domain-containing sensor histidine kinase | - |
| ROSERS_RS12155 (RoseRS_2352) | - | 2909746..2910543 (-) | 798 | WP_011957076.1 | DUF5317 family protein | - |
| ROSERS_RS27180 | - | 2910552..2910674 (-) | 123 | WP_269625479.1 | hypothetical protein | - |
| ROSERS_RS12160 (RoseRS_2353) | rcrQ | 2910933..2911172 (+) | 240 | WP_041333578.1 | hypothetical protein | Regulator |
| ROSERS_RS12165 (RoseRS_2354) | - | 2911204..2914416 (-) | 3213 | WP_011957077.1 | tetratricopeptide repeat protein | - |
| ROSERS_RS12170 (RoseRS_2355) | - | 2914605..2915456 (+) | 852 | WP_011957078.1 | alpha/beta fold hydrolase | - |
Sequence
Protein
Download Length: 79 a.a. Molecular weight: 8974.28 Da Isoelectric Point: 8.1353
>NTDB_id=28311 ROSERS_RS12160 WP_041333578.1 2910933..2911172(+) (rcrQ) [Roseiflexus sp. RS-1]
MLALDEATSSIDSATEMLLQETLERIRRTRTSVVIAHRLSTIRNADRIIVMHRGRIVEDGDHEGLLARGGFCARLHRHQ
MLALDEATSSIDSATEMLLQETLERIRRTRTSVVIAHRLSTIRNADRIIVMHRGRIVEDGDHEGLLARGGFCARLHRHQ
Nucleotide
Download Length: 240 bp
>NTDB_id=28311 ROSERS_RS12160 WP_041333578.1 2910933..2911172(+) (rcrQ) [Roseiflexus sp. RS-1]
GTGCTGGCGCTCGACGAGGCCACATCCAGCATTGATAGCGCCACTGAAATGCTCCTCCAGGAGACGCTGGAGCGCATCCG
GCGCACCCGTACCAGTGTGGTGATCGCCCATCGCCTGTCAACCATTCGCAATGCTGATCGCATCATCGTCATGCACCGTG
GGCGCATTGTTGAGGATGGCGATCATGAGGGGTTGCTGGCGCGCGGCGGCTTCTGTGCGCGGTTGCATCGTCATCAATAA
GTGCTGGCGCTCGACGAGGCCACATCCAGCATTGATAGCGCCACTGAAATGCTCCTCCAGGAGACGCTGGAGCGCATCCG
GCGCACCCGTACCAGTGTGGTGATCGCCCATCGCCTGTCAACCATTCGCAATGCTGATCGCATCATCGTCATGCACCGTG
GGCGCATTGTTGAGGATGGCGATCATGAGGGGTTGCTGGCGCGCGGCGGCTTCTGTGCGCGGTTGCATCGTCATCAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rcrQ | Streptococcus mutans UA159 |
55.696 |
100 |
0.557 |
| comA | Streptococcus pneumoniae TIGR4 |
45.333 |
94.937 |
0.43 |
| comA | Streptococcus pneumoniae D39 |
45.333 |
94.937 |
0.43 |
| comA | Streptococcus pneumoniae R6 |
45.333 |
94.937 |
0.43 |
| comA | Streptococcus pneumoniae Rx1 |
45.333 |
94.937 |
0.43 |
| comA/nlmT | Streptococcus mutans UA159 |
46.479 |
89.873 |
0.418 |
| comA | Streptococcus mitis SK321 |
44 |
94.937 |
0.418 |
| comA | Streptococcus mitis NCTC 12261 |
44 |
94.937 |
0.418 |
| comA | Streptococcus gordonii str. Challis substr. CH1 |
42.254 |
89.873 |
0.38 |