Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | SAURJH9_RS01685 | Genome accession | NC_009487 |
| Coordinates | 371503..371973 (+) | Length | 156 a.a. |
| NCBI ID | WP_000934759.1 | Uniprot ID | A0A2I7Y8V1 |
| Organism | Staphylococcus aureus subsp. aureus JH9 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 361159..403422 | 371503..371973 | within | 0 |
Gene organization within MGE regions
Location: 361159..403422
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SAURJH9_RS01600 (SaurJH9_0304) | - | 361159..362364 (-) | 1206 | WP_000264186.1 | tyrosine-type recombinase/integrase | - |
| SAURJH9_RS01605 (SaurJH9_0305) | - | 362475..362654 (+) | 180 | WP_000337827.1 | hypothetical protein | - |
| SAURJH9_RS01610 (SaurJH9_0307) | - | 362780..363271 (-) | 492 | WP_001077638.1 | hypothetical protein | - |
| SAURJH9_RS01615 (SaurJH9_0308) | - | 363292..363753 (-) | 462 | WP_000525016.1 | hypothetical protein | - |
| SAURJH9_RS01620 (SaurJH9_0309) | - | 363766..364089 (-) | 324 | WP_001260487.1 | helix-turn-helix domain-containing protein | - |
| SAURJH9_RS01625 (SaurJH9_0310) | - | 364253..364501 (+) | 249 | WP_000272858.1 | helix-turn-helix domain-containing protein | - |
| SAURJH9_RS15975 (SaurJH9_0311) | - | 364516..364677 (+) | 162 | WP_001153175.1 | hypothetical protein | - |
| SAURJH9_RS01630 | - | 364670..364906 (-) | 237 | WP_000856472.1 | hypothetical protein | - |
| SAURJH9_RS01635 | - | 365357..365542 (+) | 186 | WP_000933365.1 | helix-turn-helix domain-containing protein | - |
| SAURJH9_RS01640 (SaurJH9_0312) | - | 365544..366296 (+) | 753 | WP_001148634.1 | phage antirepressor KilAC domain-containing protein | - |
| SAURJH9_RS16035 | - | 366312..366411 (+) | 100 | Protein_323 | hypothetical protein | - |
| SAURJH9_RS01650 (SaurJH9_0314) | - | 366560..366823 (+) | 264 | WP_001124198.1 | helix-turn-helix domain-containing protein | - |
| SAURJH9_RS01655 (SaurJH9_0315) | - | 366835..366996 (+) | 162 | WP_000066020.1 | DUF1270 domain-containing protein | - |
| SAURJH9_RS01660 (SaurJH9_0316) | - | 367091..367393 (+) | 303 | WP_000165371.1 | DUF2482 family protein | - |
| SAURJH9_RS01665 (SaurJH9_0317) | - | 367398..367658 (+) | 261 | WP_000291510.1 | DUF1108 family protein | - |
| SAURJH9_RS15155 (SaurJH9_0318) | - | 367667..367930 (+) | 264 | WP_001205732.1 | hypothetical protein | - |
| SAURJH9_RS01670 (SaurJH9_0319) | - | 367939..369882 (+) | 1944 | WP_000700554.1 | AAA family ATPase | - |
| SAURJH9_RS01675 (SaurJH9_0320) | - | 369884..370804 (+) | 921 | WP_000180599.1 | recombinase RecT | - |
| SAURJH9_RS01680 (SaurJH9_0321) | - | 370885..371502 (+) | 618 | WP_064135358.1 | MBL fold metallo-hydrolase | - |
| SAURJH9_RS01685 (SaurJH9_0322) | ssbA | 371503..371973 (+) | 471 | WP_000934759.1 | single-stranded DNA-binding protein | Machinery gene |
| SAURJH9_RS01690 (SaurJH9_0323) | - | 372003..372896 (+) | 894 | WP_000148333.1 | DnaD domain protein | - |
| SAURJH9_RS01695 (SaurJH9_0324) | - | 372903..373121 (+) | 219 | WP_000338528.1 | hypothetical protein | - |
| SAURJH9_RS01700 (SaurJH9_0325) | - | 373130..373534 (+) | 405 | WP_000401969.1 | RusA family crossover junction endodeoxyribonuclease | - |
| SAURJH9_RS01705 (SaurJH9_0326) | - | 373547..373915 (+) | 369 | WP_000101282.1 | SA1788 family PVL leukocidin-associated protein | - |
| SAURJH9_RS01710 (SaurJH9_0327) | - | 373919..374161 (+) | 243 | WP_000132210.1 | SAV1978 family virulence-associated passenger protein | - |
| SAURJH9_RS01715 (SaurJH9_0328) | - | 374175..374381 (+) | 207 | WP_000693995.1 | hypothetical protein | - |
| SAURJH9_RS01720 (SaurJH9_0329) | - | 374384..374785 (+) | 402 | WP_000695762.1 | hypothetical protein | - |
| SAURJH9_RS01725 (SaurJH9_0330) | - | 374782..375129 (+) | 348 | WP_000979209.1 | YopX family protein | - |
| SAURJH9_RS01730 (SaurJH9_0331) | - | 375126..375434 (+) | 309 | WP_000144711.1 | hypothetical protein | - |
| SAURJH9_RS01735 (SaurJH9_0332) | - | 375427..375675 (+) | 249 | WP_001065026.1 | DUF1024 family protein | - |
| SAURJH9_RS01740 (SaurJH9_0333) | - | 375668..376204 (+) | 537 | WP_000185682.1 | dUTPase | - |
| SAURJH9_RS01745 (SaurJH9_0334) | - | 376241..376477 (+) | 237 | WP_000195831.1 | DUF1381 domain-containing protein | - |
| SAURJH9_RS01750 (SaurJH9_0335) | - | 376502..376738 (+) | 237 | WP_000483479.1 | hypothetical protein | - |
| SAURJH9_RS01755 (SaurJH9_0336) | - | 376728..377117 (+) | 390 | WP_001580341.1 | hypothetical protein | - |
| SAURJH9_RS01760 (SaurJH9_0337) | rinB | 377114..377287 (+) | 174 | WP_000595257.1 | transcriptional activator RinB | - |
| SAURJH9_RS01765 (SaurJH9_0338) | - | 377288..377653 (+) | 366 | WP_000989954.1 | hypothetical protein | - |
| SAURJH9_RS01770 (SaurJH9_0339) | - | 377654..377800 (+) | 147 | WP_000989960.1 | hypothetical protein | - |
| SAURJH9_RS01775 (SaurJH9_0340) | - | 377824..378246 (+) | 423 | WP_000162702.1 | RinA family phage transcriptional activator | - |
| SAURJH9_RS01780 (SaurJH9_0341) | - | 378574..379068 (+) | 495 | WP_000594082.1 | terminase small subunit | - |
| SAURJH9_RS01785 (SaurJH9_0342) | - | 379061..380269 (+) | 1209 | WP_000606640.1 | PBSX family phage terminase large subunit | - |
| SAURJH9_RS01790 (SaurJH9_0343) | - | 380283..381701 (+) | 1419 | WP_000283553.1 | phage portal protein | - |
| SAURJH9_RS01795 (SaurJH9_0344) | - | 381640..382620 (+) | 981 | WP_001795666.1 | phage head morphogenesis protein | - |
| SAURJH9_RS01800 (SaurJH9_0345) | - | 382718..383314 (+) | 597 | WP_000366932.1 | phage scaffolding protein | - |
| SAURJH9_RS01805 (SaurJH9_0346) | - | 383335..384159 (+) | 825 | WP_001135558.1 | N4-gp56 family major capsid protein | - |
| SAURJH9_RS01810 (SaurJH9_0347) | - | 384176..384502 (+) | 327 | WP_000278799.1 | Rho termination factor N-terminal domain-containing protein | - |
| SAURJH9_RS01815 (SaurJH9_0348) | - | 384502..384816 (+) | 315 | WP_000338935.1 | phage head-tail connector protein | - |
| SAURJH9_RS01820 (SaurJH9_0349) | - | 384809..385144 (+) | 336 | WP_000482986.1 | phage head closure protein | - |
| SAURJH9_RS01825 (SaurJH9_0350) | - | 385131..385544 (+) | 414 | WP_001151335.1 | HK97-gp10 family putative phage morphogenesis protein | - |
| SAURJH9_RS01830 (SaurJH9_0351) | - | 385557..385994 (+) | 438 | WP_000270197.1 | DUF3168 domain-containing protein | - |
| SAURJH9_RS01835 (SaurJH9_0352) | - | 385981..386541 (+) | 561 | WP_000046067.1 | hypothetical protein | - |
| SAURJH9_RS01840 (SaurJH9_0353) | - | 386603..387097 (+) | 495 | WP_000141082.1 | tail assembly chaperone | - |
| SAURJH9_RS01845 (SaurJH9_0354) | - | 387118..387459 (+) | 342 | WP_001580347.1 | hypothetical protein | - |
| SAURJH9_RS01850 (SaurJH9_0355) | - | 387462..390431 (+) | 2970 | WP_000414235.1 | terminase | - |
| SAURJH9_RS01855 (SaurJH9_0356) | - | 390446..391381 (+) | 936 | WP_000560196.1 | phage tail domain-containing protein | - |
| SAURJH9_RS01860 (SaurJH9_0357) | - | 391392..393278 (+) | 1887 | WP_001144708.1 | SGNH/GDSL hydrolase family protein | - |
| SAURJH9_RS01865 (SaurJH9_0358) | - | 393291..395189 (+) | 1899 | WP_000323256.1 | hypothetical protein | - |
| SAURJH9_RS01870 (SaurJH9_0359) | - | 395189..397012 (+) | 1824 | WP_000259638.1 | phage baseplate upper protein | - |
| SAURJH9_RS01875 (SaurJH9_0360) | - | 397012..397389 (+) | 378 | WP_000705893.1 | DUF2977 domain-containing protein | - |
| SAURJH9_RS01880 (SaurJH9_0361) | - | 397393..397566 (+) | 174 | WP_001790193.1 | XkdX family protein | - |
| SAURJH9_RS01885 (SaurJH9_0362) | - | 397607..397906 (+) | 300 | WP_000466769.1 | DUF2951 domain-containing protein | - |
| SAURJH9_RS01890 (SaurJH9_0363) | - | 398043..399917 (+) | 1875 | WP_000524044.1 | glucosaminidase domain-containing protein | - |
| SAURJH9_RS01895 (SaurJH9_0364) | - | 399930..401102 (+) | 1173 | WP_000276655.1 | BppU family phage baseplate upper protein | - |
| SAURJH9_RS01900 (SaurJH9_0365) | - | 401108..401503 (+) | 396 | WP_000398864.1 | hypothetical protein | - |
| SAURJH9_RS01905 (SaurJH9_0366) | - | 401559..401996 (+) | 438 | WP_000354129.1 | phage holin | - |
| SAURJH9_RS01910 (SaurJH9_0367) | - | 401977..403422 (+) | 1446 | WP_001148113.1 | SH3 domain-containing protein | - |
Sequence
Protein
Download Length: 156 a.a. Molecular weight: 17641.52 Da Isoelectric Point: 5.2672
>NTDB_id=28170 SAURJH9_RS01685 WP_000934759.1 371503..371973(+) (ssbA) [Staphylococcus aureus subsp. aureus JH9]
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
MLNRTILVGRLTRDPELRTTQSGVNVASFTLAVNRTFTNAQGEREADFINIIVFKKQAENVNKYLSKGSLAGVDGRLQTR
NYENKEGQRVYVTEVIADSIQFLEPKNSNDTQQDLYQQQVQQTRGQSQYSNNKPVKDNPFANANGPIEIDDNDLPF
Nucleotide
Download Length: 471 bp
>NTDB_id=28170 SAURJH9_RS01685 WP_000934759.1 371503..371973(+) (ssbA) [Staphylococcus aureus subsp. aureus JH9]
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
ATGCTAAACAGAACAATATTAGTTGGTCGTTTAACTAGAGACCCAGAATTAAGAACCACTCAAAGTGGTGTAAATGTAGC
ATCATTCACATTAGCAGTTAACCGCACATTTACGAATGCACAAGGAGAGCGCGAGGCAGACTTTATTAATATCATCGTAT
TTAAAAAACAAGCAGAGAACGTTAATAAATACCTATCTAAAGGATCGTTGGCGGGCGTAGATGGTAGGTTACAAACGCGG
AACTATGAAAATAAGGAAGGTCAACGTGTATACGTTACGGAAGTTATTGCTGATAGTATTCAATTTTTAGAACCGAAAAA
CTCAAATGACACTCAACAAGATTTATATCAACAACAAGTACAACAAACACGTGGACAATCGCAATATTCAAATAACAAAC
CAGTAAAAGATAATCCGTTTGCGAATGCAAATGGTCCGATTGAAATAGATGACAATGATTTACCATTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
55.932 |
100 |
0.635 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
50.588 |
100 |
0.551 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
59.434 |
67.949 |
0.404 |
| ssb | Glaesserella parasuis strain SC1401 |
32.203 |
100 |
0.365 |