Detailed information NTG0281558

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: C4X49_RS16745
• Genome accession: NZ_CP028138
• Coordinates: 3404886..3405944 (-)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain NCIMB 8209
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3399886..3410944

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C4X49_RS16720 (C4X49_16710)	-	3402013..3402507 (-)	495	WP_001003818.1	IS630 family transposase	-
C4X49_RS16725 (C4X49_16715)	-	3402555..3402860 (-)	306	WP_000122230.1	IS630 transposase-related protein	-
C4X49_RS16730 (C4X49_16720)	pilP	3402970..3403497 (-)	528	WP_000695065.1	pilus assembly protein PilP	Machinery gene
C4X49_RS16735 (C4X49_16725)	pilO	3403508..3404248 (-)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
C4X49_RS16740 (C4X49_16730)	pilN	3404245..3404886 (-)	642	WP_000201224.1	PilN domain-containing protein	Machinery gene
C4X49_RS16745 (C4X49_16735)	pilM	3404886..3405944 (-)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
C4X49_RS16750 (C4X49_16740)	ponA	3406106..3408661 (+)	2556	WP_000736674.1	penicillin-binding protein PBP1a	-
C4X49_RS16755 (C4X49_16745)	-	3408679..3409503 (-)	825	WP_102891621.1	putative RNA methyltransferase	-
C4X49_RS16760 (C4X49_16750)	-	3409506..3409838 (-)	333	WP_000169602.1	hypothetical protein	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=281558 C4X49_RS16745 WP_002014066.1 3404886..3405944(-) (pilM) [Acinetobacter baumannii strain NCIMB 8209]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=281558 C4X49_RS16745 WP_002014066.1 3404886..3405944(-) (pilM) [Acinetobacter baumannii strain NCIMB 8209]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTATGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGCCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCAGAGCGAAAAAAGATCGTTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGCTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423