Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | C1N69_RS01565 | Genome accession | NZ_CP027986 |
| Coordinates | 335034..335558 (+) | Length | 174 a.a. |
| NCBI ID | WP_008503384.1 | Uniprot ID | A0A156LWB5 |
| Organism | Enterobacter sichuanensis strain SGAir0282 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 330034..340558
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C1N69_RS01545 (C1N69_01555) | aphA | 330357..331070 (+) | 714 | WP_025757841.1 | acid phosphatase AphA | - |
| C1N69_RS01550 (C1N69_01560) | - | 331184..331600 (+) | 417 | WP_155030557.1 | secondary thiamine-phosphate synthase enzyme YjbQ | - |
| C1N69_RS01555 (C1N69_01565) | - | 331603..331956 (+) | 354 | WP_025757844.1 | MmcQ/YjbR family DNA-binding protein | - |
| C1N69_RS01560 (C1N69_01570) | uvrA | 331960..334782 (-) | 2823 | WP_047957548.1 | excinuclease ABC subunit UvrA | - |
| C1N69_RS01565 (C1N69_01580) | ssb | 335034..335558 (+) | 525 | WP_008503384.1 | single-stranded DNA-binding protein SSB1 | Machinery gene |
| C1N69_RS01570 (C1N69_01585) | - | 335675..336133 (+) | 459 | WP_155030558.1 | hypothetical protein | - |
| C1N69_RS01575 (C1N69_01590) | - | 336252..336533 (-) | 282 | WP_025757848.1 | YjcB family protein | - |
| C1N69_RS01580 (C1N69_01595) | - | 337021..338421 (+) | 1401 | WP_155030559.1 | GGDEF domain-containing protein | - |
| C1N69_RS01585 (C1N69_01600) | - | 338761..340326 (+) | 1566 | WP_025757851.1 | EAL domain-containing protein | - |
Sequence
Protein
Download Length: 174 a.a. Molecular weight: 18593.60 Da Isoelectric Point: 5.2456
>NTDB_id=281111 C1N69_RS01565 WP_008503384.1 335034..335558(+) (ssb) [Enterobacter sichuanensis strain SGAir0282]
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAP
SNEPPMDFDDDIPF
MASRGVNKVILVGNLGQDPEVRYMPSGGAVANITLATSESWRDKATGEMKEQTEWHRVVLFGKLAEVAGEYLRKGSQVYI
EGQLRTRKWTDQSGAEKYTTEVVVNVGGTMQMLGGRQGGGAPAGGGQQQGGWGQPQQPQGGNQFSGGAQSRPQQQSAPAP
SNEPPMDFDDDIPF
Nucleotide
Download Length: 525 bp
>NTDB_id=281111 C1N69_RS01565 WP_008503384.1 335034..335558(+) (ssb) [Enterobacter sichuanensis strain SGAir0282]
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCAGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTGTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGTGCTGAGAAGTACACCACTGAAGTGGTGGTTAACGTCGG
TGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGTGGCCAGCAGCAGGGCGGTTGGGGTC
AGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGTCTGCGCCGGCGCCG
TCTAACGAACCGCCAATGGATTTCGACGACGACATTCCGTTCTGA
ATGGCCAGCAGAGGCGTAAACAAGGTGATTCTCGTCGGTAATCTGGGCCAGGACCCGGAAGTACGCTACATGCCGAGTGG
TGGCGCAGTTGCCAACATTACGCTGGCTACTTCCGAATCCTGGCGTGATAAAGCGACCGGTGAGATGAAAGAGCAGACCG
AATGGCACCGCGTTGTGCTGTTTGGCAAACTGGCAGAAGTGGCCGGTGAGTATCTGCGTAAAGGTTCTCAGGTGTATATC
GAAGGCCAGCTGCGTACCCGCAAATGGACCGATCAGTCCGGTGCTGAGAAGTACACCACTGAAGTGGTGGTTAACGTCGG
TGGCACCATGCAGATGCTGGGTGGCCGTCAGGGCGGTGGCGCACCAGCAGGTGGTGGCCAGCAGCAGGGCGGTTGGGGTC
AGCCTCAGCAGCCACAGGGCGGCAACCAGTTCAGCGGCGGCGCACAGTCTCGTCCGCAGCAGCAGTCTGCGCCGGCGCCG
TCTAACGAACCGCCAATGGATTTCGACGACGACATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
76.111 |
100 |
0.787 |
| ssb | Glaesserella parasuis strain SC1401 |
57.377 |
100 |
0.603 |
| ssb | Neisseria meningitidis MC58 |
47.191 |
100 |
0.483 |
| ssb | Neisseria gonorrhoeae MS11 |
47.191 |
100 |
0.483 |
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
35.556 |
100 |
0.368 |