Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | ASA_RS04205 | Genome accession | NC_009348 |
| Coordinates | 838362..838682 (-) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida subsp. salmonicida A449 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 833362..843682
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ASA_RS04185 (ASA_0815) | - | 833690..834388 (-) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| ASA_RS04190 (ASA_0816) | - | 834742..835713 (+) | 972 | WP_011898383.1 | response regulator | - |
| ASA_RS04195 (ASA_0817) | - | 835745..837142 (-) | 1398 | WP_011898384.1 | peptide MFS transporter | - |
| ASA_RS04200 (ASA_0818) | galU | 837356..838267 (-) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| ASA_RS04205 (ASA_0819) | comEA | 838362..838682 (-) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| ASA_RS04210 (ASA_0820) | cysQ | 838850..839620 (+) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| ASA_RS04215 (ASA_0821) | - | 839702..839998 (-) | 297 | WP_005318066.1 | YciI family protein | - |
| ASA_RS04220 (ASA_0822) | - | 840025..840576 (-) | 552 | WP_005318063.1 | septation protein A | - |
| ASA_RS04225 (ASA_0823) | - | 840661..842196 (-) | 1536 | WP_005318060.1 | pyridoxal-dependent decarboxylase | - |
| ASA_RS04230 (ASA_0824) | - | 842421..843056 (+) | 636 | WP_005318058.1 | hemolysin III family protein | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=27899 ASA_RS04205 WP_005318073.1 838362..838682(-) (comEA) [Aeromonas salmonicida subsp. salmonicida A449]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=27899 ASA_RS04205 WP_005318073.1 838362..838682(-) (comEA) [Aeromonas salmonicida subsp. salmonicida A449]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |