Detailed information NTG0278774

Bioinformatically predicted

Overview

• Name: comM
• Type: Machinery gene
• Locus tag: C6Y50_RS09460
• Genome accession: NZ_CP027664
• Coordinates: 2034738..2035802 (+)
• Length: 354 a.a.
• NCBI ID: WP_045159370.1
• Uniprot ID: A0AA42PD57
• Organism: Stutzerimonas stutzeri strain 1W1-1A
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2029738..2040802

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6Y50_RS09445 (C6Y50_09450)	-	2029864..2030658 (+)	795	WP_061373875.1	thermonuclease family protein	-
C6Y50_RS09450 (C6Y50_09455)	-	2030800..2032068 (+)	1269	WP_011911783.1	malic enzyme-like NAD(P)-binding protein	-
C6Y50_RS09455 (C6Y50_09460)	-	2032135..2034558 (-)	2424	WP_061373876.1	penicillin-binding protein 1A	-
C6Y50_RS09460 (C6Y50_09465)	comM	2034738..2035802 (+)	1065	WP_045159370.1	pilus assembly protein PilM	Machinery gene
C6Y50_RS09465 (C6Y50_09470)	pilN	2035802..2036374 (+)	573	WP_011911787.1	type 4a pilus biogenesis protein PilN	-
C6Y50_RS09470 (C6Y50_09475)	pilO	2036371..2036997 (+)	627	WP_045632889.1	type 4a pilus biogenesis protein PilO	-
C6Y50_RS09475 (C6Y50_09480)	pilP	2036994..2037521 (+)	528	WP_045159373.1	type 4a pilus biogenesis lipoprotein PilP	-
C6Y50_RS09480 (C6Y50_09485)	pilQ	2037575..2039695 (+)	2121	WP_106442740.1	type IV pilus secretin PilQ	Machinery gene
C6Y50_RS09485 (C6Y50_09490)	aroK	2039699..2040244 (+)	546	WP_017244294.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37730.25 Da
• Isoelectric Point: 4.6880

>NTDB_id=278774 C6Y50_RS09460 WP_045159370.1 2034738..2035802(+) (comM) [Stutzerimonas stutzeri strain 1W1-1A]
MLGLFTKKANTLLGIDISSTSVKLLELSRSGNRYRVEAYAVEPLPPNAVVEKNIAELEGVGQALQRVVAKAKTGCKSAVV
AVSGSAVITKMIEMDAGLSDEELENQLKIEADQYIPYPLEEVAIDFEVQGPAPRAPGRVEVLLAACRKENVEIREAALAL
AGLTAKVVDVEAYALERSYGLLASQLGTGHGELTVAVVDIGATMTTLSVLHNGRTIYTREQLFGGRQLTEEIQRRYGLSQ
EEAGLAKKQGGLPDDYDSEVLLPFKEAVVQQVSRSLQFFFAAGQFHDVDCILLAGGTASIPGLDHMIQQKIGTQTLVANP
FADMALSGKVNAGALASDAPALMIACGLALRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=278774 C6Y50_RS09460 WP_045159370.1 2034738..2035802(+) (comM) [Stutzerimonas stutzeri strain 1W1-1A]
GTGCTAGGGCTCTTCACTAAGAAAGCGAACACGCTGCTTGGGATCGATATCAGTTCGACCTCAGTCAAGCTCCTCGAATT
AAGTCGATCGGGTAATCGGTACCGCGTCGAGGCTTATGCCGTCGAGCCGCTACCGCCGAATGCCGTCGTCGAAAAGAACA
TCGCCGAACTTGAGGGTGTCGGTCAGGCCCTGCAGCGAGTCGTTGCCAAGGCCAAGACCGGCTGCAAGTCCGCTGTTGTC
GCTGTCTCCGGGTCTGCCGTCATCACAAAGATGATTGAGATGGATGCCGGGCTTTCTGATGAAGAGCTCGAGAACCAGCT
CAAGATCGAGGCAGATCAGTACATCCCCTACCCACTGGAGGAAGTCGCGATCGACTTCGAGGTGCAAGGTCCTGCGCCTC
GCGCGCCTGGCAGGGTAGAGGTTCTCCTCGCCGCTTGCCGTAAAGAGAATGTCGAGATCCGTGAAGCCGCGCTGGCCTTG
GCTGGACTTACCGCCAAAGTGGTGGATGTCGAGGCCTATGCGCTTGAGCGCTCCTACGGATTGCTCGCTTCACAGTTGGG
TACAGGGCACGGCGAGCTGACCGTTGCCGTCGTCGACATCGGCGCGACCATGACAACCCTGAGCGTGCTGCATAACGGGC
GTACCATCTACACGCGCGAGCAGCTGTTCGGTGGTCGCCAACTGACCGAAGAGATCCAGCGCCGCTACGGTCTGTCTCAG
GAAGAAGCCGGCCTTGCCAAGAAGCAAGGCGGTCTCCCAGATGACTACGACAGTGAAGTCCTGCTTCCGTTCAAGGAGGC
GGTGGTGCAGCAGGTATCCCGCTCGTTGCAGTTCTTCTTCGCTGCAGGGCAGTTCCACGACGTCGACTGCATTCTGCTCG
CGGGCGGGACGGCCTCCATTCCAGGTCTCGATCACATGATTCAGCAAAAGATCGGAACGCAAACTCTAGTGGCTAATCCC
TTCGCCGATATGGCTTTGAGCGGCAAGGTGAACGCCGGGGCGCTGGCTAGTGATGCGCCTGCATTAATGATTGCATGCGG
TTTGGCGCTGAGGAGCTTTGACTGA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comM	Acinetobacter nosocomialis M2	55.932	100	0.559
pilM	Acinetobacter baumannii D1279779	55.932	100	0.559
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.328	100	0.463