Detailed information    

insolico Bioinformatically predicted

Overview

Name   mecA   Type   Regulator
Locus tag   SPYM_RS01280 Genome accession   NC_009332
Coordinates   240132..240893 (+) Length   253 a.a.
NCBI ID   WP_002986029.1    Uniprot ID   -
Organism   Streptococcus pyogenes str. Manfredo     
Function   degradation of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 235132..245893
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SPYM_RS01265 (SpyM50215) - 235390..236958 (-) 1569 WP_002991130.1 ABC transporter substrate-binding protein/permease -
  SPYM_RS01270 (SpyM50216) - 237156..239081 (+) 1926 WP_011888593.1 DUF2207 domain-containing protein -
  SPYM_RS01275 (SpyM50217) - 239147..239986 (+) 840 WP_011888594.1 undecaprenyl-diphosphate phosphatase -
  SPYM_RS01280 (SpyM50218) mecA 240132..240893 (+) 762 WP_002986029.1 adaptor protein MecA Regulator
  SPYM_RS01285 (SpyM50219) - 240900..242069 (+) 1170 WP_011888595.1 glycosyltransferase family 4 protein -
  SPYM_RS01290 (SpyM50220) sufC 242191..242961 (+) 771 WP_002986023.1 Fe-S cluster assembly ATPase SufC -
  SPYM_RS01295 (SpyM50221) sufD 243056..244318 (+) 1263 WP_011054182.1 Fe-S cluster assembly protein SufD -
  SPYM_RS01300 (SpyM50222) - 244349..245575 (+) 1227 WP_002986020.1 cysteine desulfurase -

Sequence

Protein


Download         Length: 253 a.a.        Molecular weight: 29051.72 Da        Isoelectric Point: 4.1622

>NTDB_id=27842 SPYM_RS01280 WP_002986029.1 240132..240893(+) (mecA) [Streptococcus pyogenes str. Manfredo]
MEMKQISETTLKITISMDDLEERGMELKDFLIPQEKTEEFFYSVMDELDLPDNFKDSGMLSFRVTPRKDRLDVFVTKSEI
NKDINLEDLAEFGDMSQMTPEDFFKSLEQSMREKGDVKAHEKLEKIEEIMEDVVEATLANQSEAADPSTNHESEPLDYVH
YVLDFSTITEAVAFAKTIDFSIEASELYKGSNCYHMTILLDVQQQPSYFANVMYARLIEHANPGSKTRAYLQEHGLQLML
DGAVEQLQKIELG

Nucleotide


Download         Length: 762 bp        

>NTDB_id=27842 SPYM_RS01280 WP_002986029.1 240132..240893(+) (mecA) [Streptococcus pyogenes str. Manfredo]
ATGGAAATGAAACAAATTAGCGAGACAACGCTAAAAATAACAATTAGTATGGACGATTTAGAAGAAAGAGGAATGGAGTT
GAAAGATTTCTTGATTCCTCAAGAAAAAACAGAAGAGTTTTTCTATTCTGTGATGGACGAACTCGATCTTCCAGATAATT
TTAAAGATAGTGGTATGCTTAGTTTTCGAGTGACTCCACGCAAGGACCGTCTAGATGTTTTTGTTACCAAATCTGAGATA
AATAAAGATATTAATCTTGAAGATTTAGCAGAGTTTGGTGATATGTCCCAAATGACTCCGGAAGATTTTTTCAAGAGCTT
GGAGCAATCCATGCGTGAAAAGGGAGATGTCAAAGCTCATGAAAAATTGGAAAAAATTGAAGAGATAATGGAAGATGTTG
TTGAAGCCACTCTAGCTAATCAGTCTGAGGCGGCTGATCCATCAACTAATCATGAGTCAGAACCTTTAGACTATGTCCAT
TATGTATTGGATTTTTCAACGATTACAGAGGCAGTGGCTTTTGCTAAAACGATTGATTTTTCGATAGAAGCTTCAGAGTT
ATATAAGGGGAGCAACTGCTACCATATGACTATTTTATTAGATGTTCAGCAACAACCATCTTATTTTGCGAATGTCATGT
ATGCGAGATTGATTGAGCATGCAAACCCTGGATCAAAAACAAGAGCTTATTTACAAGAGCATGGCTTACAATTGATGCTT
GATGGTGCTGTTGAGCAATTACAAAAGATTGAGTTGGGATAA

Domains

Predicted by InterproScan.

Negative regulator of genetic competence (MecA) (MecA)

(1-247)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Streptococcus mutans UA159

63.2

98.814

0.625
  mecA Streptococcus thermophilus LMD-9

56.225

98.419

0.553
  mecA Streptococcus thermophilus LMG 18311

55.422

98.419

0.545
  mecA Streptococcus pneumoniae Rx1

48.235

100

0.486
  mecA Streptococcus pneumoniae D39

48.235

100

0.486
  mecA Streptococcus pneumoniae R6

48.235

100

0.486
  mecA Streptococcus pneumoniae TIGR4

48.235

100

0.486

Multiple sequence alignment