Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   SSA_RS03760 Genome accession   NC_009009
Coordinates   730808..731758 (+) Length   316 a.a.
NCBI ID   WP_011836698.1    Uniprot ID   A3CLX7
Organism   Streptococcus sanguinis SK36     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 725808..736758
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSA_RS03735 (SSA_0744) queA 725866..726894 (-) 1029 WP_011836693.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  SSA_RS03740 (SSA_0745) - 726904..727083 (-) 180 WP_002897949.1 hypothetical protein -
  SSA_RS03745 (SSA_0746) nagB 727218..727925 (+) 708 WP_011836695.1 glucosamine-6-phosphate deaminase -
  SSA_RS03750 (SSA_0747) - 728076..729431 (+) 1356 WP_011836696.1 DUF1958 domain-containing protein -
  SSA_RS03755 (SSA_0748) - 729526..730695 (+) 1170 WP_011836697.1 MFS transporter -
  SSA_RS03760 (SSA_0749) coiA 730808..731758 (+) 951 WP_011836698.1 competence protein CoiA Machinery gene
  SSA_RS03765 (SSA_0750) - 731929..732315 (+) 387 WP_011836699.1 DUF1310 family protein -
  SSA_RS03770 (SSA_0751) pepF 732507..734309 (+) 1803 WP_011836700.1 oligoendopeptidase F Regulator
  SSA_RS03775 (SSA_0752) - 734311..734994 (+) 684 WP_011836701.1 O-methyltransferase -
  SSA_RS03780 (SSA_0753) prsA 735108..736115 (+) 1008 WP_011836702.1 peptidylprolyl isomerase PrsA -

Sequence


Protein


Download         Length: 316 a.a.        Molecular weight: 37462.09 Da        Isoelectric Point: 7.6554

>NTDB_id=27517 SSA_RS03760 WP_011836698.1 730808..731758(+) (coiA) [Streptococcus sanguinis SK36]
MFVARNHKGLLCNALEEKIEKGADFVCPACSGAVRFKKGKVMQPHFAHVSLEQCSFYRENESAEHLNLKAELFRWAVQTE
EVEVEAFLPALQQIADLLVDEKLALEVQCSLLSIERLQERTLSYRQHGYQVLWLLGRKLWLKDSLTRLQKDFLYFSKNMG
FHLWELDQEKQVLRLKYLIHEDLHGKVQHKTKNFPFGHGQLLDILRLPFQKQEMNSFLAQQDPQICSYIRRQLYYQQPRW
MRLQAQLYQAGDNLLTKAAEDFYPQVRPIQATSFCQITTDLTDYYQQFENYYANLQQKNLQIVYSPAFYEMIREKC

Nucleotide


Download         Length: 951 bp        

>NTDB_id=27517 SSA_RS03760 WP_011836698.1 730808..731758(+) (coiA) [Streptococcus sanguinis SK36]
ATGTTTGTGGCGCGAAATCATAAGGGACTTTTGTGTAATGCTCTGGAGGAGAAGATTGAGAAGGGGGCTGATTTTGTCTG
CCCAGCTTGTTCGGGGGCAGTCCGTTTTAAAAAAGGAAAGGTCATGCAGCCGCATTTTGCGCATGTTTCGCTAGAGCAGT
GTAGCTTTTATAGGGAAAATGAGAGCGCTGAGCACCTCAATCTTAAGGCGGAGCTTTTTCGCTGGGCTGTCCAAACAGAA
GAAGTTGAGGTGGAGGCTTTTTTGCCTGCTCTGCAGCAGATTGCTGATCTACTGGTTGATGAAAAACTGGCGCTTGAAGT
CCAGTGCAGTCTCCTAAGTATAGAACGGTTGCAGGAACGGACGCTTTCTTACCGCCAGCATGGTTATCAGGTTCTCTGGC
TTTTGGGGCGAAAACTTTGGCTCAAGGATTCCCTAACTCGCCTGCAGAAGGATTTTCTCTATTTTAGTAAAAATATGGGC
TTTCATCTTTGGGAGCTAGATCAAGAAAAGCAAGTTCTGCGTCTCAAATACCTGATTCACGAAGATCTGCATGGAAAAGT
TCAGCACAAGACTAAGAACTTTCCCTTTGGTCACGGTCAGCTTTTGGATATTTTGCGTTTGCCCTTTCAAAAGCAGGAGA
TGAACAGCTTTCTTGCCCAGCAAGATCCGCAGATCTGCAGCTATATCCGCCGTCAGCTTTATTACCAGCAACCTAGATGG
ATGAGGCTGCAGGCTCAGCTCTATCAGGCTGGAGATAATCTCCTGACTAAGGCTGCAGAGGATTTTTATCCGCAGGTTCG
GCCAATACAAGCTACCTCCTTCTGTCAGATAACTACTGACCTGACTGACTATTACCAGCAGTTTGAGAATTATTACGCCA
ATCTCCAGCAAAAAAATCTGCAAATTGTTTATTCACCGGCTTTTTATGAGATGATAAGAGAAAAATGCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A3CLX7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Streptococcus mitis NCTC 12261

55.484

98.101

0.544

  coiA Streptococcus pneumoniae TIGR4

53.871

98.101

0.528

  coiA Streptococcus pneumoniae Rx1

53.871

98.101

0.528

  coiA Streptococcus pneumoniae D39

53.871

98.101

0.528

  coiA Streptococcus pneumoniae R6

53.871

98.101

0.528

  coiA Lactococcus lactis subsp. cremoris KW2

42.769

100

0.44


Multiple sequence alignment