Detailed information    

insolico Bioinformatically predicted

Overview

Name   pepF   Type   Regulator
Locus tag   SSA_RS03770 Genome accession   NC_009009
Coordinates   732507..734309 (+) Length   600 a.a.
NCBI ID   WP_011836700.1    Uniprot ID   A3CLX9
Organism   Streptococcus sanguinis SK36     
Function   degradation of XIP; competence shut-off (predicted from homology)   
Competence regulation

Genomic Context

Location: 727507..739309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSA_RS03750 (SSA_0747) - 728076..729431 (+) 1356 WP_011836696.1 DUF1958 domain-containing protein -
  SSA_RS03755 (SSA_0748) - 729526..730695 (+) 1170 WP_011836697.1 MFS transporter -
  SSA_RS03760 (SSA_0749) coiA 730808..731758 (+) 951 WP_011836698.1 competence protein CoiA Machinery gene
  SSA_RS03765 (SSA_0750) - 731929..732315 (+) 387 WP_011836699.1 DUF1310 family protein -
  SSA_RS03770 (SSA_0751) pepF 732507..734309 (+) 1803 WP_011836700.1 oligoendopeptidase F Regulator
  SSA_RS03775 (SSA_0752) - 734311..734994 (+) 684 WP_011836701.1 O-methyltransferase -
  SSA_RS03780 (SSA_0753) prsA 735108..736115 (+) 1008 WP_011836702.1 peptidylprolyl isomerase PrsA -
  SSA_RS03785 (SSA_0755) - 736256..736837 (+) 582 WP_164925988.1 LURP-one-related/scramblase family protein -

Sequence

Protein


Download         Length: 600 a.a.        Molecular weight: 69213.15 Da        Isoelectric Point: 4.5346

>NTDB_id=27518 SSA_RS03770 WP_011836700.1 732507..734309(+) (pepF) [Streptococcus sanguinis SK36]
MAKQRNEIEEKYTWDLSTIFPTDEAFEEELAQVSEEVKKAASLAGHLLDSADSLLTTTEVQLDLMRRIEKLYSYAHMKND
QDTRVAKYQEYQAKGMTLYSDFGQSFAFYEPEFMAITEEQYQAFLAEQPALQQYQHYFDKLLKKKAHILTQREEELLAGA
GEIFGAAGETFAILDNADIVFPMVHDEDGNEVQLSHGNYITLVESKNREVRKEAYEALYSVYEQYQHTYAKTLQTNVKVH
NYNAKVRKFSSAREAALSADFIPESVYDSLVSAVNKHLSLLQRYIALRAKILGISDLKMYDMYTPLSETDYKFTYEEALA
KSEEVLAILGEDYLSRVKTAFSERWIDVHENQGKRSGAYSGGSYDTNAFMLLNWQDTLDNFFTLVHETGHSMHSSYTRET
QPYVYGDYSIFLAEIASTTNENILTEKLLEEVEDDATRFAILNHFLDGFRGTVFRQTQFAEFEHAIHKADQEGQVLTSEF
LNELYADLNEKYYGLKKEDNPQIQYEWARIPHFYYDYYVFQYSTGFSAASALAEKIVHGSQEDKDKYLDYLKAGNSDYPL
NVIKKAGVDMEKEDYLNAAFAVFERRLDEFEALVEKLGLA

Nucleotide


Download         Length: 1803 bp        

>NTDB_id=27518 SSA_RS03770 WP_011836700.1 732507..734309(+) (pepF) [Streptococcus sanguinis SK36]
ATGGCAAAACAAAGAAATGAAATTGAAGAAAAATATACTTGGGATTTGAGTACCATTTTCCCAACAGATGAAGCCTTTGA
AGAGGAATTGGCTCAGGTTTCAGAAGAAGTGAAGAAAGCAGCTAGTCTGGCTGGGCATTTGCTTGATTCAGCGGACAGTC
TCTTAACAACGACTGAAGTGCAGTTGGACTTGATGCGTCGTATTGAAAAGCTTTATTCTTATGCTCACATGAAGAATGAC
CAGGATACACGTGTGGCTAAGTACCAAGAGTATCAGGCTAAAGGCATGACTCTTTACAGCGACTTTGGTCAAAGCTTTGC
TTTCTATGAGCCAGAATTTATGGCGATTACAGAAGAGCAGTACCAAGCTTTCTTGGCTGAGCAGCCAGCCTTGCAGCAGT
ATCAGCATTATTTTGACAAGCTTTTGAAAAAGAAAGCCCATATCCTAACACAGCGTGAAGAGGAGCTATTGGCCGGTGCT
GGTGAAATTTTTGGTGCAGCGGGCGAAACCTTTGCTATCTTGGATAATGCGGATATTGTCTTTCCGATGGTGCATGACGA
AGATGGAAATGAAGTTCAGCTCAGCCACGGTAACTATATCACCTTGGTTGAGTCTAAGAACCGAGAAGTCCGTAAGGAAG
CTTACGAGGCTCTCTACAGCGTCTACGAGCAGTATCAGCATACCTATGCTAAGACTTTGCAGACCAATGTCAAGGTTCAC
AATTACAATGCGAAAGTCCGCAAGTTCTCATCTGCCCGTGAAGCGGCTTTGTCAGCTGACTTTATTCCAGAAAGCGTCTA
TGACAGCCTAGTTTCAGCTGTCAATAAGCATTTGTCTCTTTTGCAGCGTTATATTGCTTTGCGAGCGAAGATTTTAGGTA
TTTCTGACTTGAAGATGTATGATATGTACACACCTTTGTCAGAGACAGACTACAAGTTCACTTATGAGGAAGCCCTGGCT
AAGTCTGAGGAAGTTCTGGCTATTCTGGGTGAGGATTATCTGAGCCGAGTGAAGACAGCTTTTTCAGAGCGCTGGATTGA
TGTTCATGAAAATCAAGGCAAGCGCTCAGGGGCATACTCTGGCGGTTCTTATGACACCAACGCCTTTATGTTGCTCAACT
GGCAGGACACGCTGGATAATTTCTTTACCTTGGTGCATGAGACAGGCCACAGTATGCACTCCAGCTACACCCGTGAGACC
CAGCCTTATGTCTATGGAGATTACTCTATCTTCCTAGCTGAGATTGCTTCAACGACCAATGAAAATATTCTGACAGAAAA
GCTTTTGGAAGAAGTAGAGGACGATGCTACCCGCTTTGCTATCCTCAATCACTTCTTAGATGGCTTCCGAGGAACCGTCT
TCCGTCAAACCCAGTTTGCTGAGTTTGAGCATGCTATCCACAAGGCTGACCAAGAAGGGCAAGTTTTGACCAGCGAGTTT
CTCAATGAGCTCTACGCTGATTTGAACGAGAAATACTATGGACTGAAAAAAGAAGACAATCCGCAGATTCAGTACGAATG
GGCACGCATTCCTCACTTCTACTATGATTACTATGTTTTCCAATATTCGACAGGATTTTCAGCGGCTTCTGCCTTGGCTG
AAAAGATTGTCCATGGCAGTCAGGAAGACAAGGATAAGTATCTGGACTATCTCAAAGCTGGGAACTCTGACTACCCACTT
AATGTCATCAAAAAAGCAGGTGTGGATATGGAAAAAGAAGACTACCTAAATGCTGCTTTTGCTGTCTTTGAGCGTCGCTT
GGACGAATTCGAAGCCTTGGTCGAGAAGTTGGGACTGGCATAA

Domains

Predicted by InterproScan.

Peptidase family M3 (Peptidase_M3)

(202-581)

Oligopeptidase F (Peptidase_M3_N)

(112-181)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3CLX9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pepF Streptococcus salivarius strain HSISS4

68.289

99.333

0.678

Multiple sequence alignment