Detailed information
Bioinformatically predicted
Overview
| Name | comEA | Type | Machinery gene |
| Locus tag | C5P03_RS04120 | Genome accession | NZ_CP027000 |
| Coordinates | 832418..832738 (-) | Length | 106 a.a. |
| NCBI ID | WP_005318073.1 | Uniprot ID | A4SJ96 |
| Organism | Aeromonas salmonicida subsp. salmonicida 01-B526 | ||
| Function | dsDNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 827418..837738
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5P03_RS04100 (C5P03_04100) | - | 827746..828444 (-) | 699 | WP_005318084.1 | DnaT-like ssDNA-binding domain-containing protein | - |
| C5P03_RS04105 (C5P03_04105) | - | 828798..829769 (+) | 972 | WP_011898383.1 | response regulator | - |
| C5P03_RS04110 (C5P03_04110) | - | 829801..831198 (-) | 1398 | WP_011898384.1 | peptide MFS transporter | - |
| C5P03_RS04115 (C5P03_04115) | galU | 831412..832323 (-) | 912 | WP_005318075.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| C5P03_RS04120 (C5P03_04120) | comEA | 832418..832738 (-) | 321 | WP_005318073.1 | ComEA family DNA-binding protein | Machinery gene |
| C5P03_RS04125 (C5P03_04125) | cysQ | 832906..833676 (+) | 771 | WP_005318069.1 | 3'(2'),5'-bisphosphate nucleotidase CysQ | - |
| C5P03_RS04130 (C5P03_04130) | - | 833758..834054 (-) | 297 | WP_005318066.1 | YciI family protein | - |
| C5P03_RS04135 (C5P03_04135) | - | 834081..834632 (-) | 552 | WP_005318063.1 | septation protein A | - |
| C5P03_RS04140 (C5P03_04140) | - | 834718..836253 (-) | 1536 | WP_005318060.1 | pyridoxal-dependent decarboxylase | - |
| C5P03_RS04145 (C5P03_04145) | trhA | 836478..837113 (+) | 636 | WP_005318058.1 | PAQR family membrane homeostasis protein TrhA | - |
Sequence
Protein
Download Length: 106 a.a. Molecular weight: 11222.15 Da Isoelectric Point: 10.0215
>NTDB_id=274401 C5P03_RS04120 WP_005318073.1 832418..832738(-) (comEA) [Aeromonas salmonicida subsp. salmonicida 01-B526]
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
MNYKILTATLLLSCLPLLSQPLLAADKPAAKPATTVTTAKESGKVNLNTASINELTALKGIGEKKAQAIVDFRQKQGKFT
TVEQLADVSGIGPATLEANRDMIIVK
Nucleotide
Download Length: 321 bp
>NTDB_id=274401 C5P03_RS04120 WP_005318073.1 832418..832738(-) (comEA) [Aeromonas salmonicida subsp. salmonicida 01-B526]
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
ATGAACTACAAAATCCTGACCGCCACCCTGCTGCTGAGCTGCCTGCCCCTGCTCAGCCAGCCTTTGCTGGCCGCCGACAA
GCCGGCTGCCAAGCCAGCGACCACGGTCACCACCGCCAAGGAGAGTGGCAAGGTGAACCTGAATACGGCCAGTATCAATG
AGTTAACTGCCCTCAAGGGGATCGGAGAGAAGAAGGCGCAGGCCATCGTCGATTTTCGTCAGAAACAGGGCAAGTTCACC
ACGGTTGAACAACTGGCGGATGTCAGCGGCATAGGGCCGGCCACTCTGGAAGCAAATCGGGACATGATCATCGTCAAATA
G
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comEA | Vibrio cholerae C6706 |
50 |
100 |
0.519 |
| comEA | Vibrio cholerae strain A1552 |
50 |
100 |
0.519 |
| comEA | Vibrio parahaemolyticus RIMD 2210633 |
46.392 |
91.509 |
0.425 |
| comE1/comEA | Haemophilus influenzae Rd KW20 |
42.453 |
100 |
0.425 |
| comEA/comE1 | Glaesserella parasuis strain SC1401 |
61.905 |
59.434 |
0.368 |