Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | NPM_RS24175 | Genome accession | NZ_CP026681 |
| Coordinates | 5592985..5593350 (+) | Length | 121 a.a. |
| NCBI ID | WP_069073698.1 | Uniprot ID | A0A2D0HCN5 |
| Organism | Nostoc sp. 'Peltigera membranacea cyanobiont' N6 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 5587985..5598350
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NPM_RS24155 (NPM_4631) | - | 5588489..5588788 (+) | 300 | WP_104900756.1 | type II toxin-antitoxin system HigB family toxin | - |
| NPM_RS24160 (NPM_4632) | - | 5588772..5589173 (+) | 402 | WP_094332442.1 | hypothetical protein | - |
| NPM_RS24165 (NPM_4633) | hmpF | 5589346..5591106 (-) | 1761 | WP_094332455.1 | pilus motility taxis protein HmpF | - |
| NPM_RS24170 (NPM_4634) | - | 5591574..5592770 (+) | 1197 | WP_094332441.1 | response regulator | - |
| NPM_RS24175 (NPM_4635) | pilH | 5592985..5593350 (+) | 366 | WP_069073698.1 | response regulator | Machinery gene |
| NPM_RS24180 (NPM_4636) | - | 5593364..5593894 (+) | 531 | WP_012412196.1 | chemotaxis protein CheW | - |
| NPM_RS24185 (NPM_4637) | - | 5593909..5596845 (+) | 2937 | WP_104901921.1 | methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13350.52 Da Isoelectric Point: 4.8604
>NTDB_id=271729 NPM_RS24175 WP_069073698.1 5592985..5593350(+) (pilH) [Nostoc sp. 'Peltigera membranacea cyanobiont' N6]
MSTVLIVEDSIAQREMITDLLKATGLTVTHASDGLEALEAIQIAPPDLVVLDIVMPRMNGYEVCRRLKSDPKTQNVPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
MSTVLIVEDSIAQREMITDLLKATGLTVTHASDGLEALEAIQIAPPDLVVLDIVMPRMNGYEVCRRLKSDPKTQNVPVVM
CSSKGEEFDRYWGMKQGADAYIAKPFQPTELVGTVKQLLRG
Nucleotide
Download Length: 366 bp
>NTDB_id=271729 NPM_RS24175 WP_069073698.1 5592985..5593350(+) (pilH) [Nostoc sp. 'Peltigera membranacea cyanobiont' N6]
ATGAGTACAGTTCTGATTGTAGAAGACAGTATCGCACAAAGGGAGATGATTACAGACCTCCTGAAAGCAACTGGACTAAC
AGTTACCCATGCTAGTGATGGATTAGAAGCATTGGAGGCAATTCAAATAGCACCTCCCGATTTAGTGGTGTTGGATATTG
TTATGCCCCGGATGAACGGCTACGAAGTTTGTCGGCGGTTAAAATCCGATCCAAAAACCCAAAATGTCCCTGTGGTGATG
TGTTCTTCCAAAGGCGAAGAATTCGATCGCTATTGGGGCATGAAGCAGGGTGCAGATGCCTACATAGCCAAACCGTTTCA
ACCAACCGAATTGGTAGGAACAGTCAAACAACTGCTGCGAGGATAA
ATGAGTACAGTTCTGATTGTAGAAGACAGTATCGCACAAAGGGAGATGATTACAGACCTCCTGAAAGCAACTGGACTAAC
AGTTACCCATGCTAGTGATGGATTAGAAGCATTGGAGGCAATTCAAATAGCACCTCCCGATTTAGTGGTGTTGGATATTG
TTATGCCCCGGATGAACGGCTACGAAGTTTGTCGGCGGTTAAAATCCGATCCAAAAACCCAAAATGTCCCTGTGGTGATG
TGTTCTTCCAAAGGCGAAGAATTCGATCGCTATTGGGGCATGAAGCAGGGTGCAGATGCCTACATAGCCAAACCGTTTCA
ACCAACCGAATTGGTAGGAACAGTCAAACAACTGCTGCGAGGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
76.86 |
100 |
0.769 |
| micA | Streptococcus pneumoniae Cp1015 |
39.167 |
99.174 |
0.388 |
| pilG | Acinetobacter baumannii strain A118 |
41.228 |
94.215 |
0.388 |
| vicR | Streptococcus mutans UA159 |
38.333 |
99.174 |
0.38 |
| pilL-C | Synechocystis sp. PCC 6803 |
37.5 |
99.174 |
0.372 |