Detailed information NTG0027076

Bioinformatically predicted

Overview

• Name: rexB
• Type: Machinery gene
• Locus tag: SGO_RS06935
• Genome accession: NC_009785
• Coordinates: 1460513..1463794 (-)
• Length: 1093 a.a.
• NCBI ID: WP_012130499.1
• Uniprot ID: A8AY34
• Organism: Streptococcus gordonii str. Challis substr. CH1
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1455513..1468794

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SGO_RS06925 (SGO_1412)	-	1456527..1456832 (-)	306	WP_012130497.1	DUF4298 domain-containing protein	-
SGO_RS06930 (SGO_1413)	rexA	1456866..1460516 (-)	3651	WP_012130498.1	helicase-exonuclease AddAB subunit AddA	Machinery gene
SGO_RS06935 (SGO_1414)	rexB	1460513..1463794 (-)	3282	WP_012130499.1	ATP-dependent nuclease subunit B	Machinery gene
SGO_RS06940 (SGO_1415)	-	1464176..1467349 (-)	3174	WP_012130500.1	CocE/NonD family hydrolase	-

Sequence

Protein

• Length: 1093 a.a.
• Molecular weight: 124541.39 Da
• Isoelectric Point: 4.8938

>NTDB_id=27076 SGO_RS06935 WP_012130499.1 1460513..1463794(-) (rexB) [Streptococcus gordonii str. Challis substr. CH1]
MKLLYTDIRHSLTKVLVAEAESLVATGKRVFYIAPNSLSFEKERAVLECLKTKASFAITVTRFAQMARYFVLNDVRKGQS
LDDIGLGMLIYRTLTELDDGELKVYGRIKKDPQFIQQLMDLYHELQTAQMSFADLEFLEEPEKREDLVKIFTAVATALNK
GDFDSSSQIATFAQHILSGDTDEELADLALVIDGFTRFSAEEEYLVGLLHRKGVEIVIGTYASQKAYRAAFRDGNLYQAS
VDFLRKLAEDYQVKPDYIPYAEAEDAFGRISKVLESRYDFSEPAVEVSETDRSQLQIWATMNQKEELEYVAKSIRQRVHD
GVRYKDIRLLFGDVEAYQLQLKTIFDQYQIPYYLGRSESMAQHPLVQFVESLERLKRYNFQLEDLLNLLKTGIYGDLTQE
ELDHFEQYLRFADIKGAVKLAKDFTANSQGKFDLDRLNHIRRRVMAPLQDFFKSRSQTASGLLAKFTEFVQAARLSDNLT
ALLQEESHQEQERHEEVWKAFSHVLEQFAQVFADSKVKLDDFLALVLSGMLLSNYRTVPATVDVVKVQSYDLIEPLAAPY
VYAIGLTQERFPKIAQNKSLLSDEDRARLNDATDSQAELQIASSENLKKNRYTALSLMNSATKELVLSAPALVNEVEDSM
STYLLELTAAPLSLPIIVKKPQASSDDIGSYRALLSQIIELHQEEIDREWTAEEQTFWAVAVRVLRKKLAAEGISIPQIS
KELKTESLQPETLHALYPKDQPLRLSASALSEYFKNQYGYFIKYILGLQEEWTIHPDARSHGNFLHRIFEKVLQEDTSRD
FDQRLEVAIDETMRETEFESLYNESSESLFTRQLLLDTAKSTGQVLAQSAGIETIGEETVFGNSKEPFLILEDGRAVSVR
GKVDRIDRLLADGSLGVVDYKSSETKFSYEKFFNGLNSQLPTYLAAIQELQGQQEGRDLFGAMYLQMTEPIVALKDTKEL
GDAVKEVAKTMQYKGLFLADKLASLGPVYEKSKVNSLSQEELAVLLAYNEILYKKVAEGILAGHFEVNPYTENGRNIAPY
VDQFKAITGFEANRHLGQARQLDKLDLSKFEKRPVGEKLRRAWIEKMREELEK

Nucleotide

• Length: 3282 bp

>NTDB_id=27076 SGO_RS06935 WP_012130499.1 1460513..1463794(-) (rexB) [Streptococcus gordonii str. Challis substr. CH1]
ATGAAATTACTTTATACAGATATTCGCCATTCTTTGACCAAGGTTTTAGTGGCTGAGGCTGAGAGTTTGGTGGCAACTGG
TAAGCGAGTCTTTTATATTGCGCCAAATTCGCTTTCTTTTGAGAAGGAGCGAGCGGTTTTGGAGTGCCTGAAGACCAAGG
CTTCCTTTGCCATTACGGTGACGCGCTTTGCCCAGATGGCTCGGTATTTTGTCCTCAATGATGTCCGAAAAGGGCAGAGT
TTGGACGATATTGGTCTGGGAATGCTGATTTATCGGACCTTGACAGAGTTAGATGATGGAGAGCTTAAGGTCTATGGCAG
GATTAAGAAGGATCCCCAGTTTATCCAGCAGCTGATGGATCTTTACCATGAACTGCAGACAGCCCAGATGTCCTTTGCGG
ATTTGGAATTTCTTGAGGAGCCTGAGAAGCGGGAGGATCTGGTCAAGATTTTTACAGCTGTGGCTACGGCTCTAAATAAG
GGTGATTTTGACTCATCCTCTCAGATTGCGACTTTTGCTCAGCATATTCTGTCAGGCGACACAGATGAGGAATTGGCAGA
TTTGGCTCTGGTCATTGATGGCTTTACGCGTTTTTCTGCCGAAGAGGAATACCTGGTCGGTCTCCTGCATCGAAAAGGCG
TGGAGATTGTCATCGGGACCTATGCCAGCCAAAAAGCCTATCGAGCAGCCTTTCGTGATGGCAATCTCTATCAGGCCAGC
GTGGATTTTCTGAGAAAGCTGGCCGAGGACTATCAGGTCAAGCCTGACTATATCCCTTATGCGGAAGCAGAAGATGCCTT
TGGCCGGATTTCTAAAGTCTTGGAGAGTCGCTATGACTTTTCTGAGCCTGCTGTTGAAGTTAGTGAGACAGATCGCTCCC
AGCTTCAAATCTGGGCTACTATGAACCAGAAAGAAGAGCTGGAGTATGTGGCCAAGTCCATCCGGCAGCGAGTTCATGAT
GGTGTGCGTTATAAGGATATTCGTCTACTATTTGGGGATGTGGAAGCCTACCAGCTTCAGCTCAAGACTATTTTTGACCA
ATATCAGATTCCTTACTATCTAGGGCGGAGCGAGTCAATGGCTCAGCATCCGCTGGTTCAGTTTGTCGAGTCCTTGGAGC
GGCTCAAGCGCTATAATTTCCAACTGGAAGACCTGCTCAACCTCTTAAAGACAGGGATCTACGGAGATTTGACTCAGGAG
GAGCTGGATCATTTTGAGCAATATCTGCGCTTTGCGGATATCAAGGGAGCAGTCAAGCTAGCCAAGGATTTCACGGCCAA
TAGTCAAGGGAAATTTGACCTAGACCGTCTCAATCATATTCGTCGTCGGGTCATGGCTCCGCTGCAAGACTTTTTCAAAT
CCCGTAGCCAGACGGCGTCAGGGCTCTTAGCTAAGTTTACGGAGTTCGTCCAAGCAGCCCGTTTGTCTGACAATTTGACG
GCTCTACTGCAGGAAGAAAGTCATCAGGAGCAGGAGCGCCATGAGGAAGTCTGGAAGGCTTTCAGCCATGTCTTAGAGCA
GTTTGCTCAGGTCTTTGCAGATAGTAAGGTCAAGTTGGACGATTTTTTGGCCTTAGTCTTATCAGGCATGCTTTTGTCCA
ACTATCGAACAGTACCGGCGACGGTAGATGTAGTCAAGGTTCAGTCTTATGACCTGATAGAGCCTTTAGCTGCACCTTAT
GTTTATGCGATTGGATTGACTCAGGAGCGTTTCCCGAAAATCGCGCAAAATAAGAGCCTGCTCAGTGATGAAGACCGGGC
TCGGCTCAATGACGCGACGGATTCTCAGGCGGAACTGCAGATTGCTAGTTCAGAAAATCTCAAGAAGAATCGCTACACAG
CGCTGTCGCTGATGAATTCTGCCACCAAAGAGCTGGTCTTGTCTGCGCCAGCTTTGGTCAATGAAGTAGAGGACAGCATG
TCGACCTATCTGCTGGAATTGACTGCAGCTCCGCTTTCCTTGCCCATCATTGTCAAAAAGCCTCAGGCTTCTAGTGATGA
TATTGGCAGCTACCGAGCTCTCTTGTCTCAAATCATCGAACTCCACCAAGAGGAGATTGACCGAGAGTGGACAGCAGAGG
AGCAGACCTTTTGGGCGGTGGCTGTGCGGGTTCTCCGCAAGAAGTTAGCAGCAGAAGGCATCAGCATTCCGCAAATCAGC
AAGGAACTGAAAACGGAGTCTCTGCAACCGGAAACTCTGCATGCCCTTTATCCAAAAGATCAGCCTCTCCGACTTTCAGC
CTCTGCTCTAAGCGAATACTTTAAAAATCAATATGGCTATTTCATCAAATACATTCTGGGATTACAGGAAGAGTGGACTA
TTCATCCAGATGCTAGAAGCCACGGAAATTTTCTGCATCGAATTTTTGAGAAAGTACTTCAGGAGGATACTAGTCGAGAC
TTTGACCAGCGACTAGAAGTGGCAATAGACGAGACTATGCGGGAGACTGAATTTGAAAGTCTCTACAATGAATCTAGTGA
GAGTCTCTTTACTCGTCAATTGCTACTAGATACTGCTAAGTCAACTGGTCAAGTTCTGGCTCAGTCAGCTGGTATTGAAA
CGATTGGGGAAGAAACAGTCTTTGGGAACAGTAAAGAGCCTTTCCTTATCTTAGAAGATGGCAGAGCTGTTAGTGTTCGA
GGCAAGGTGGATAGAATTGACCGTTTGCTAGCTGATGGGAGTCTGGGAGTCGTGGACTATAAGTCCAGTGAGACTAAGTT
TAGCTATGAAAAATTTTTTAATGGTCTGAATTCTCAGCTTCCGACTTATCTAGCGGCTATCCAGGAACTCCAAGGTCAGC
AGGAAGGTAGAGATCTTTTCGGTGCCATGTACTTGCAAATGACAGAGCCTATTGTTGCCCTTAAAGATACCAAAGAGCTA
GGAGATGCGGTCAAGGAAGTTGCGAAAACCATGCAGTACAAGGGACTCTTTTTAGCAGATAAGCTGGCCTCTTTGGGTCC
TGTTTATGAAAAGAGCAAGGTTAATAGTCTCAGTCAAGAAGAACTGGCTGTTTTACTTGCTTATAATGAAATTCTCTATA
AAAAAGTAGCTGAAGGCATTCTGGCTGGTCACTTTGAGGTTAATCCCTATACAGAAAATGGCCGGAATATAGCACCTTAT
GTCGATCAGTTTAAGGCTATTACCGGCTTTGAAGCTAATCGCCACCTAGGCCAAGCCAGACAGCTAGATAAATTAGATTT
GAGTAAATTTGAAAAACGTCCAGTTGGTGAGAAACTGCGCCGAGCATGGATAGAAAAGATGAGGGAGGAATTGGAAAAAT
GA

Domains

Predicted by InterProScan.

• PD-(D/E)XK nuclease superfamily (PDDEXK_1) (744-1031)

3D structure

• AlphaFold DB: A8AY34

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rexB	Streptococcus pneumoniae R6	57.247	100	0.575