Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   DXY22_RS20935 Genome accession   NZ_CP031693
Coordinates   4074275..4074988 (-) Length   237 a.a.
NCBI ID   WP_003244535.1    Uniprot ID   O06978
Organism   Bacillus subtilis strain SRCM101393     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 4069275..4079988
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DXY22_RS20915 (DXY22_04122) ghrB 4069419..4070396 (+) 978 WP_072557265.1 D-glycerate dehydrogenase -
  DXY22_RS20920 (DXY22_04123) psdB 4070434..4072374 (-) 1941 WP_101172216.1 lantibiotic ABC transporter permease PsdB -
  DXY22_RS20925 (DXY22_04124) psdA 4072349..4073128 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  DXY22_RS20930 (DXY22_04125) psdS 4073211..4074281 (-) 1071 WP_029318347.1 two-component sensor histidine kinase PsdS -
  DXY22_RS20935 (DXY22_04126) braR 4074275..4074988 (-) 714 WP_003244535.1 two-component system response regulator PsdR Regulator
  DXY22_RS20940 (DXY22_04127) - 4075135..4075344 (+) 210 WP_029318346.1 hypothetical protein -
  DXY22_RS20945 (DXY22_04128) yvcN 4075380..4076144 (-) 765 WP_015251150.1 arylamine N-acetyltransferase -
  DXY22_RS20950 (DXY22_04129) crh 4076145..4076402 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  DXY22_RS20955 (DXY22_04130) whiA 4076426..4077376 (-) 951 WP_003243775.1 DNA-binding protein WhiA -
  DXY22_RS20960 (DXY22_04131) mgfK 4077399..4078352 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -
  DXY22_RS20965 (DXY22_04132) rapZ 4078354..4079241 (-) 888 WP_003243903.1 RNase adapter RapZ -
  DXY22_RS20970 (DXY22_04133) rppI 4079266..4079742 (-) 477 WP_080265396.1 8-oxo-dGTP diphosphatase -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27514.39 Da        Isoelectric Point: 4.6062

>NTDB_id=270610 DXY22_RS20935 WP_003244535.1 4074275..4074988(-) (braR) [Bacillus subtilis strain SRCM101393]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLTDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=270610 DXY22_RS20935 WP_003244535.1 4074275..4074988(-) (braR) [Bacillus subtilis strain SRCM101393]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATATTCGCCCTCTTTGCCGCAGGAATCTAGAATAG
TGGAGCTTGGCGGGCTGACGATTTATCCTGATCAGAATGAGGCCGAATGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAATCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
CAGATTGCATTTCCACAATCAGAGGACAAGGTTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB O06978

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43

Multiple sequence alignment