Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | C2E56_RS09085 | Genome accession | NZ_CP026084 |
| Coordinates | 1770759..1771250 (-) | Length | 163 a.a. |
| NCBI ID | WP_000609584.1 | Uniprot ID | - |
| Organism | Streptococcus agalactiae strain NJ1606 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1765759..1776250
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C2E56_RS09070 (C2E56_09425) | - | 1768665..1769336 (-) | 672 | WP_000174846.1 | DUF1129 domain-containing protein | - |
| C2E56_RS09075 (C2E56_09430) | - | 1769361..1770305 (-) | 945 | WP_000812124.1 | magnesium transporter CorA family protein | - |
| C2E56_RS09080 (C2E56_09435) | rpsR | 1770475..1770714 (-) | 240 | WP_000068665.1 | 30S ribosomal protein S18 | - |
| C2E56_RS09085 (C2E56_09440) | ssbA | 1770759..1771250 (-) | 492 | WP_000609584.1 | single-stranded DNA-binding protein | Machinery gene |
| C2E56_RS09090 (C2E56_09445) | rpsF | 1771262..1771549 (-) | 288 | WP_001151773.1 | 30S ribosomal protein S6 | - |
| C2E56_RS09095 (C2E56_09450) | mutY | 1772613..1773767 (+) | 1155 | WP_161508544.1 | A/G-specific adenine glycosylase | - |
| C2E56_RS09100 (C2E56_09455) | - | 1773944..1774537 (+) | 594 | WP_000402388.1 | helix-turn-helix domain-containing protein | - |
| C2E56_RS09105 (C2E56_09460) | trxA | 1774583..1774915 (-) | 333 | WP_001932060.1 | thioredoxin | - |
| C2E56_RS09110 (C2E56_09465) | - | 1774978..1775478 (-) | 501 | WP_000446807.1 | phosphatase PAP2 family protein | - |
Sequence
Protein
Download Length: 163 a.a. Molecular weight: 18175.85 Da Isoelectric Point: 4.9119
>NTDB_id=266967 C2E56_RS09085 WP_000609584.1 1770759..1771250(-) (ssbA) [Streptococcus agalactiae strain NJ1606]
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSAPSQQTPNFSRDESPFGNSNPMDISDDD
LPF
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQSGEREADFINCVIWRQQAENLANWAKKGALVGITGRIQTR
NYENQQGQRVYVTEVVAESFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSAPSQQTPNFSRDESPFGNSNPMDISDDD
LPF
Nucleotide
Download Length: 492 bp
>NTDB_id=266967 C2E56_RS09085 WP_000609584.1 1770759..1771250(-) (ssbA) [Streptococcus agalactiae strain NJ1606]
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACACGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTC
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
ATGATTAATAATGTAGTACTTGTAGGTCGCATGACCCGTGATGCAGAACTTCGTTATACACCAAGTAATCAAGCGGTAGC
CACTTTTTCACTTGCAGTTAATCGTAATTTTAAAAATCAATCTGGCGAACGTGAGGCTGATTTTATTAACTGTGTTATTT
GGCGCCAACAAGCTGAAAACTTGGCTAACTGGGCAAAAAAAGGTGCTTTGGTTGGAATTACAGGTCGTATCCAAACACGT
AATTATGAAAACCAACAAGGTCAACGTGTCTATGTAACAGAAGTTGTTGCGGAAAGTTTCCAATTATTGGAAAGTCGTGC
TACACGAGAAGGTGGTTCACCTAACTCTTATAATAACGGTGGCTATAACAATGCTCCGTCAAATAATAGTTATTCAGCTC
CTTCTCAACAAACACCTAATTTTAGTCGTGATGAGAGTCCGTTTGGTAACTCAAATCCAATGGATATTTCAGATGATGAT
CTACCATTCTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
57.714 |
100 |
0.62 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
59.064 |
100 |
0.62 |
| ssbB | Streptococcus sobrinus strain NIDR 6715-7 |
55.963 |
66.871 |
0.374 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
56.604 |
65.031 |
0.368 |