Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   C2H93_RS04370 Genome accession   NZ_CP026036
Coordinates   858250..858441 (+) Length   63 a.a.
NCBI ID   WP_249852628.1    Uniprot ID   -
Organism   Bacillus subtilis strain PK5_16     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 853250..863441
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2H93_RS04340 (C2H93_04345) argF 854113..855072 (+) 960 WP_249852627.1 ornithine carbamoyltransferase -
  C2H93_RS04345 (C2H93_04350) yjzC 855158..855337 (+) 180 WP_003245356.1 YjzC family protein -
  C2H93_RS04350 (C2H93_04355) yjzD 855384..855569 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  C2H93_RS04355 (C2H93_04360) - 855818..856552 (+) 735 WP_003245223.1 hypothetical protein -
  C2H93_RS04360 (C2H93_04365) - 856634..857191 (+) 558 WP_021479559.1 hypothetical protein -
  C2H93_RS04365 (C2H93_04370) med 857282..858235 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  C2H93_RS04370 (C2H93_04375) comZ 858250..858441 (+) 192 WP_249852628.1 ComG operon transcriptional repressor ComZ Regulator
  C2H93_RS04375 (C2H93_04380) yjzB 858471..858707 (-) 237 WP_072173825.1 spore coat protein YjzB -
  C2H93_RS04380 (C2H93_04385) fabH 858872..859810 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  C2H93_RS04385 (C2H93_04390) fabF 859833..861074 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  C2H93_RS04390 (C2H93_04395) yjaZ 861150..861935 (+) 786 WP_249852629.1 DUF2268 domain-containing protein -
  C2H93_RS04395 (C2H93_04400) appD 862127..863113 (+) 987 WP_249852630.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7213.33 Da        Isoelectric Point: 4.5284

>NTDB_id=265598 C2H93_RS04370 WP_249852628.1 858250..858441(+) (comZ) [Bacillus subtilis strain PK5_16]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSKTE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=265598 C2H93_RS04370 WP_249852628.1 858250..858441(+) (comZ) [Bacillus subtilis strain PK5_16]
ATGCAGCACGAAAAATCACTTGAATTCTTGCAAATTGCCATGAAATATCTCCCTGAAGCGAAAGAACAGCTTGAGAAATC
AGGCATTGAGCTCTCAATGGAGGCCATCCAGCCGTTTATGAATCTATTTACAACGGTAATGGCGGAAGCTTATGAGCTTG
GCAAGTCTGACGCTAAATCTAAAACAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

98.413

100

0.984

Multiple sequence alignment